Pairwise Alignments

Query, 186 a.a., endonuclease SmrB from Vibrio cholerae E7946 ATCC 55056

Subject, 195 a.a., putative DNA endonuclease SmrA from Alteromonas macleodii MIT1002

 Score = 50.8 bits (120), Expect = 1e-11
 Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 12/174 (6%)

Query: 19  DDDFSLFRDEVKGVKKLRQD--TILHAPNRNPKQKEIRRTEREASDNDFYFSDEFMPHLT 76
           +DD   F  E++ VK +  D   +LH P +   +K+ +R  R+ S  +   +   M  + 
Sbjct: 6   NDDIDSFFAEMQDVKPIASDDKALLHDPEKALAEKQ-KRAARQLSVREKLANPLSMEGVK 64

Query: 77  DEGPT---RYARSDVSKYEVKRLRRGVYVPDVFLDMHGMTQQEAKRELGAMIAYCLKENV 133
              P     + +  +     K+LR G Y  +  + + G T ++++  + + I    +  V
Sbjct: 65  PVPPDDFIHFQQPGIQDGVFKKLRLGKYPLEANVTLSGKTLEQSRDLVYSTIKSSHERGV 124

Query: 134 HCACVQHGIGKH------ILKQNVPLWLAQHPDVLAFHQAPLEFGGDGALLVLL 181
               ++HG G++      + K  V  WL +  +V+A+H A    GG GA  VLL
Sbjct: 125 RALLIKHGTGENSKPFPALKKSYVNHWLRELDEVIAYHTAQPMHGGFGATYVLL 178