Pairwise Alignments

Query, 207 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 203 a.a., conserved inner membrane protein from Pseudomonas putida KT2440

 Score =  219 bits (559), Expect = 2e-62
 Identities = 104/198 (52%), Positives = 142/198 (71%)

Query: 2   LLSVLYIIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKN 61
           +L +LY+I ITAEAMTGALSAGRR MDWFGV+L+A  TA+GGG+VRD+LLGHYPL WVK+
Sbjct: 1   MLLMLYLIAITAEAMTGALSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKH 60

Query: 62  PEYLAITCVAGVLTTWVYKWVIKLKGLFIRLDALGLIVFSIIGTQVAMRMGLHPGICLVS 121
           PEYL +T  A +LT ++   + +L+ LF+ LDALGL+ F++IG   A+ MG    +  +S
Sbjct: 61  PEYLVLTSFAALLTIFIAPMMRRLRSLFLVLDALGLVAFTLIGCMTALEMGQGMLVASIS 120

Query: 122 AVVTGVFGGLLRDLICRQPPLVLHEELYASIALLASGLYLALLEFGVSDVVSTVVTLVVG 181
            V+TGVFGG+LRD+ C   PLV   ELYAS++  A+  YL  + F V    + ++TL  G
Sbjct: 121 GVITGVFGGILRDIFCNDIPLVFRRELYASVSFAAAWFYLGCVYFKVPAEQAMLLTLFGG 180

Query: 182 YTLRMAAVRFKWRLPSFH 199
           + +R+ A+RF W +P FH
Sbjct: 181 FLVRLLAIRFHWEMPKFH 198