Pairwise Alignments

Query, 207 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., Putative membrane protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 93.2 bits (230), Expect = 3e-24
 Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 15/197 (7%)

Query: 13  AEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKNPEYLAITCVAG 72
           A A++G L   R ++D  GV +V    A GGGT+RD+LL   P  WV + E L      G
Sbjct: 22  AFALSGILMGARMRLDAVGVAVVGFLAAFGGGTLRDLLLDQRPFFWVSHVELLW-----G 76

Query: 73  VLTTWVYKWVIKLKGLFIRL--------DALGLIVFSIIGTQVAMRMGLHPGICLVSAVV 124
           VL   V      L+G  ++L        DALGL +F+  G   A+ + +   + ++  ++
Sbjct: 77  VLGLCVLAMAF-LRGRHMQLTERAIQWPDALGLGLFTATGVHQALLLDMPALVAVLMGLI 135

Query: 125 TGVFGGLLRDLICRQPPLVLHEEL-YASIALLASGLYLALLEFGVSDVVSTVVTLVVGYT 183
           TGVFGG+LRD++C + P    +   YA  A     LY+ L +      ++ V  +V    
Sbjct: 136 TGVFGGVLRDVVCNEIPTAFKDHRPYALCAFAGGWLYVGLWQIEAPGWIALVACVVFTAG 195

Query: 184 LRMAAVRFKWRLPSFHL 200
           LR  A+   W+LP++ L
Sbjct: 196 LRGLALWRNWQLPAWKL 212



 Score = 26.2 bits (56), Expect = 5e-04
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 88  LFIRLDALGLIVFSIIGTQVAMRMGLHPGICLVSAVVTGVFGGLLRDLICRQPPL--VLH 145
           L + ++    + F++ G  +  RM L      V   +    GG LRDL+  Q P   V H
Sbjct: 11  LRLLVELAATVAFALSGILMGARMRLDAVGVAVVGFLAAFGGGTLRDLLLDQRPFFWVSH 70

Query: 146 EEL 148
            EL
Sbjct: 71  VEL 73



 Score = 25.8 bits (55), Expect = 6e-04
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 9   IGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKNPEYLAIT 68
           +G+     TG   A    M     +L+   T + GG +RD++    P  +  +  Y    
Sbjct: 106 LGLGLFTATGVHQALLLDMPALVAVLMGLITGVFGGVLRDVVCNEIPTAFKDHRPYALCA 165

Query: 69  CVAGVLTTWVYKWVIKLKG 87
              G L  +V  W I+  G
Sbjct: 166 FAGGWL--YVGLWQIEAPG 182