Pairwise Alignments

Query, 207 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., conserved inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  132 bits (331), Expect = 6e-36
 Identities = 75/203 (36%), Positives = 123/203 (60%), Gaps = 2/203 (0%)

Query: 1   MLLSVLYIIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVK 60
           ML+  L I+G    A++G L AG+ +MD FGV+++   TA+GGGT+RD+ L H P+ WVK
Sbjct: 1   MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVK 60

Query: 61  NPEYLAITCVAGVLTTWVYKWVIKL-KGLFIRLDALGLIVFSIIGTQVAMRMGLHPGICL 119
           +P  L +  V  +LT  + +   +L K +   LDA+GL VF  IG   A      P I +
Sbjct: 61  DPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFVGIGVNKAFNAEAGPLIAV 120

Query: 120 VSAVVTGVFGGLLRDLICRQPPLVLHEELYASIALLASGLY-LALLEFGVSDVVSTVVTL 178
              V+TGV GG++RD++ R+ P++L  E+YA+  ++   ++  A   F V    ++++ +
Sbjct: 121 CMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAYYTFSVPLETASMMGM 180

Query: 179 VVGYTLRMAAVRFKWRLPSFHLE 201
           VV   +R+AA+R+  +LP+F L+
Sbjct: 181 VVTLLIRLAAIRWHLKLPTFALD 203