Pairwise Alignments

Query, 674 a.a., bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC from Vibrio cholerae E7946 ATCC 55056

Subject, 666 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  684 bits (1765), Expect = 0.0
 Identities = 358/668 (53%), Positives = 449/668 (67%), Gaps = 10/668 (1%)

Query: 6   SISHAQLGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHNDDQRRFVIAE 65
           +I  A L +N  GTPVS  FDDVYFSN NGL ETRYVFL  N L +R+       F++AE
Sbjct: 5   AIQPATLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNRLAERFPVHSHPLFIVAE 64

Query: 66  TGFGTGLNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAWPELAQFA 125
           +GFGTGLNFL +WQAF +FR A+P A L+ LHFISFEK+PL++ DL  AHQ WPELA +A
Sbjct: 65  SGFGTGLNFLTLWQAFDSFRSAHPQATLQRLHFISFEKFPLTRDDLALAHQHWPELAPWA 124

Query: 126 QKLHKHYPLAIPECQRIVLNDGLVTLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFAPSK 185
           ++L   +PL +P C R++L+ G VTLDLWFGDI +   ++       VDAWFLDGFAP+K
Sbjct: 125 EQLQAQWPLPLPGCHRLLLDRGRVTLDLWFGDINELTDQLDATLNQTVDAWFLDGFAPAK 184

Query: 186 NPEMWNQNLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREMIAGSL 245
           NP+MW  NLF  MA+LA+ G T ATFTSAGFVRRGL +AGF M+K KGFG KREM+ G +
Sbjct: 185 NPDMWTPNLFNAMARLARPGATLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREMLCGVM 244

Query: 246 SEKVPYTNIAPEFRFEATHGLQEVAIIGGGIASATLATTLARRGVAVTLYCADEKPAQGA 305
            + +  T  AP F + +    +E AIIGGGIASA L+  L RRG  VTLYCAD++PAQGA
Sbjct: 245 EQHLMPTLSAPWF-YRSGSEKRETAIIGGGIASALLSLALLRRGWQVTLYCADDQPAQGA 303

Query: 306 SGNRQGAVYPLLSGDHNAVSRVFAPAFLFARQWIEQAAEQINFDHDWCGVTQLMWDEKAT 365
           SGNRQGA+YPLLS    A++R F  AF FAR+  +  A  ++FDHDWCGVTQL WDEK+ 
Sbjct: 304 SGNRQGALYPLLSKHDAAINRFFPTAFTFARRLYD--ALPVSFDHDWCGVTQLGWDEKSQ 361

Query: 366 DKLKSMLEGNFPTQLVHGLSAEQTNQQVGVPVDKASVHYPLGGWLSPAELTQGLIHLLEQ 425
            K+  ML    P  L   L+AE+  Q VGV      + YP GGWL P +LT+ +I L  +
Sbjct: 362 QKIAQMLSLALPAGLASALNAEEAEQAVGVTTRCGGITYPAGGWLCPEQLTRAVIALATE 421

Query: 426 QGKLTAHYQTPIDALTWQPETQLWQLR--SGDTLMSHQCVVIASGHQFDSLSQTAELPLG 483
           QG L   ++  + +L  Q     WQLR  SG+T  SH+ VV+A+GHQ +   QT  LP+ 
Sbjct: 422 QG-LQTRFRHTLTSLVAQESR--WQLRFTSGET-ASHETVVLANGHQINRFDQTQPLPVY 477

Query: 484 KVKGQVSHIPTTETLSKINSVLCYDGYMTPVSQQNGYHCIGASYDRQHLDATFDPQAQHE 543
            V GQVSHIPTT  LS +  VLCYDGY+TP +  N  HCIGASY R      +  + Q +
Sbjct: 478 AVGGQVSHIPTTPALSALRQVLCYDGYLTPQNPHNQQHCIGASYHRGDESTVWREEDQRQ 537

Query: 544 NAQKLIHCLPEQTWPLEVDVSGNQSRQGVRCVSRDHLPFVGNVGEFSKITEQYRDLA-QQ 602
           N Q+L+ C P+  W  EVDVSGN +R GVRC +RDHLP VGNV ++      Y DLA  +
Sbjct: 538 NRQRLLDCFPDAKWATEVDVSGNSARCGVRCATRDHLPMVGNVPDYHATLTHYADLADNK 597

Query: 603 HQAEPIALYPQLYALVGLGSRGLSSAPLMAELLASQMCGDPMPLGVDLLEQLHPSRMWVR 662
             A P  +YP L+ L  LGSRGL SAPL AE+LA+QM  +P+PL    L  L+P+R+WVR
Sbjct: 598 TSAAPAPVYPGLFMLGALGSRGLCSAPLCAEILAAQMSNEPIPLDAGTLAALNPNRLWVR 657

Query: 663 KLRKGKAL 670
           KL KGKA+
Sbjct: 658 KLLKGKAV 665