Pairwise Alignments

Query, 674 a.a., bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC from Vibrio cholerae E7946 ATCC 55056

Subject, 666 a.a., bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC from Erwinia tracheiphila SCR3

 Score =  655 bits (1689), Expect = 0.0
 Identities = 345/668 (51%), Positives = 435/668 (65%), Gaps = 8/668 (1%)

Query: 5   SSISHAQLGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHNDDQRRFVIA 64
           S I HA+L WN+ GTPVS  FDDVYFSN NGL E+RYVF+  N LP+R+    +  F++A
Sbjct: 4   SPIEHARLFWNEQGTPVSRTFDDVYFSNNNGLEESRYVFIAGNGLPERFVQHPRDLFIVA 63

Query: 65  ETGFGTGLNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAWPELAQF 124
           ETGFGTGLNFLA+WQAF  FR+ANP A+L+ LHFIS EKYPL+ SDL  AH +WPELA F
Sbjct: 64  ETGFGTGLNFLALWQAFAQFRQANPAARLQRLHFISCEKYPLTVSDLASAHASWPELAPF 123

Query: 125 AQKLHKHYPLAIPECQRIVLNDGLVTLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFAPS 184
           +  L + +P+A+P CQR++L+ G VTLDLWFGDI   + +         DAWFLDGF+P+
Sbjct: 124 SAALREQWPVALPGCQRVLLDSGRVTLDLWFGDINQLIHQFDDSLHQQTDAWFLDGFSPA 183

Query: 185 KNPEMWNQNLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREMIAGS 244
           KNP+MW   LF  MA L++   T +TFTSAGFVRRGL DAGF M K KGFG KREM+ G 
Sbjct: 184 KNPDMWTPALFQCMATLSRKDGTLSTFTSAGFVRRGLQDAGFTMIKRKGFGIKREMLCGV 243

Query: 245 LSEKVPYTNIAPEFRFEATHGLQEVAIIGGGIASATLATTLARRGVAVTLYCADEKPAQG 304
           L         AP +   A  G  + A+IGGGI+   LA  L RRG  VTLYCAD+  A+G
Sbjct: 244 LPRAACTQPAAPWYARPAASG-NDFAVIGGGISGVLLALALLRRGKKVTLYCADDAAAEG 302

Query: 305 ASGNRQGAVYPLLSGDHNAVSRVFAPAFLFARQWIEQAAEQINFDHDWCGVTQLMWDEKA 364
           ASGNRQGA+YPLL+    A++  F  AF FAR+  ++    + FDH WCGVTQL WDEK+
Sbjct: 303 ASGNRQGALYPLLNPHDPALACFFPSAFTFARRMYDRL--HVCFDHHWCGVTQLGWDEKS 360

Query: 365 TDKLKSMLEGNFPTQLVHGLSAEQTNQQVGVPVDKASVHYPLGGWLSPAELTQGLIHLLE 424
            DK+  M+    P QL  G+S  Q +   GV      + YP GGWLSP +LTQ L  L  
Sbjct: 361 RDKIAKMISMRLPEQLACGISKAQVDALSGVATGCDGITYPDGGWLSPGQLTQALHQLAA 420

Query: 425 QQGKLTAHYQTPIDALTWQPETQLWQLR-SGDTLMSHQCVVIASGHQFDSLSQTAELPLG 483
            QG L  +++  +  LT   +   W L  S     SHQ VV+A+GH   S SQ+ +LP+ 
Sbjct: 421 LQG-LQLNWRHHLTHLTQSDKD--WILHFSTHPQRSHQNVVLATGHALTSFSQSEKLPVY 477

Query: 484 KVKGQVSHIPTTETLSKINSVLCYDGYMTPVSQQNGYHCIGASYDRQHLDATFDPQAQHE 543
            V GQVSH+PTT  L K+  VLCYDGY+TPVS  N +HCIGASY R      +  + Q E
Sbjct: 478 AVSGQVSHVPTTPELGKLRQVLCYDGYLTPVSPTNQHHCIGASYHRGESAPRYREEDQQE 537

Query: 544 NAQKLIHCLPEQTWPLEVDVSGNQSRQGVRCVSRDHLPFVGNVGEFSKITEQYRDLAQ-Q 602
           N ++LI CLPE  W   VD+S   +R  VRC +RDHLP VG + ++ +  EQY  LA+ +
Sbjct: 538 NRERLIRCLPEAEWTKAVDISEGNARCAVRCATRDHLPMVGPLPDYQQTLEQYATLAEKK 597

Query: 603 HQAEPIALYPQLYALVGLGSRGLSSAPLMAELLASQMCGDPMPLGVDLLEQLHPSRMWVR 662
             A P  ++P L+ L  LGSRGL SAPL AE+LA+Q+ G+P+PL    L  LH +R WVR
Sbjct: 598 DHASPAPVHPGLFVLGALGSRGLCSAPLAAEVLAAQLSGEPVPLDSHTLAALHTNRYWVR 657

Query: 663 KLRKGKAL 670
           KL KGKA+
Sbjct: 658 KLLKGKAV 665