Pairwise Alignments

Query, 674 a.a., bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC from Vibrio cholerae E7946 ATCC 55056

Subject, 665 a.a., tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain from Enterobacter asburiae PDN3

 Score =  677 bits (1747), Expect = 0.0
 Identities = 351/666 (52%), Positives = 441/666 (66%), Gaps = 9/666 (1%)

Query: 5   SSISHAQLGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHNDDQRRFVIA 64
           ++I  A L +N  GTPVS  FDDVYFSN NGL ETRYVFL+ N L  R+    +  FV+A
Sbjct: 4   NAIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLDGNQLSTRFPEHPRSLFVVA 63

Query: 65  ETGFGTGLNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAWPELAQF 124
           E+GFGTGLNFL +WQAF  F  A+P+A L+ LHFISFEK+PL+  DL  AHQ WPELA +
Sbjct: 64  ESGFGTGLNFLTLWQAFDQFHAAHPEATLQRLHFISFEKFPLTAHDLRLAHQRWPELAAW 123

Query: 125 AQKLHKHYPLAIPECQRIVLNDGLVTLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFAPS 184
           A++L   +P  I  C R++L+ G VTLDLW GDI D    +       VDAWFLDGFAP+
Sbjct: 124 AEQLQAQWPPHIGGCHRLILDGGRVTLDLWLGDINDLTDTLDDSMNQTVDAWFLDGFAPA 183

Query: 185 KNPEMWNQNLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREMIAGS 244
           KNP+MW+Q+LF+ MA+LA+ G T ATFTSAGFVRRGL +AGF M+K KGFG KR+M+ G 
Sbjct: 184 KNPDMWSQHLFSAMARLARPGATLATFTSAGFVRRGLQEAGFTMQKTKGFGRKRDMLVGR 243

Query: 245 LSEKVPYTNIAPEFRFEATHGLQEVAIIGGGIASATLATTLARRGVAVTLYCADEKPAQG 304
           + + +     AP F   A+   +EV I+GGGIASA L+  L  RG  VTLYCAD+ PA G
Sbjct: 244 MEQTLDVPARAPWFARRAS-ASREVGIVGGGIASALLSLALLHRGWQVTLYCADDAPASG 302

Query: 305 ASGNRQGAVYPLLSGDHNAVSRVFAPAFLFARQWIEQAAEQINFDHDWCGVTQLMWDEKA 364
           ASGNRQGA+YPLLS    A+ R F  AF FAR+  +  A  + FDHDWCGVTQL WDEK+
Sbjct: 303 ASGNRQGALYPLLSAHDPALFRFFPAAFTFARRLYD--ALPVAFDHDWCGVTQLGWDEKS 360

Query: 365 TDKLKSMLEGNFPTQLVHGLSAEQTNQQVGVPVDKASVHYPLGGWLSPAELTQGLIHLLE 424
             K+  ML    P ++   +SA++     GV      + YPLGGWL PAELT   I L +
Sbjct: 361 QQKITQMLSLGLPDEIARAVSAQEVADTAGVETGCGGIQYPLGGWLCPAELTAAAIALAQ 420

Query: 425 QQGKLTAHYQTPIDALTWQPETQLWQLRSGD-TLMSHQCVVIASGHQFDSLSQTAELPLG 483
            +G LTAHY   +++L+    T+ W LR  D    SH  VV+A+GH     +QT  LP+ 
Sbjct: 421 SRG-LTAHYAHKVESLS---RTERWNLRFADGKEASHASVVLANGHNISQFTQTETLPVY 476

Query: 484 KVKGQVSHIPTTETLSKINSVLCYDGYMTPVSQQNGYHCIGASYDRQHLDATFDPQAQHE 543
            V GQVSHIP+   LSK+  VLCYDGY+TP +  NG+HCIGASY R   D  +    Q +
Sbjct: 477 PVGGQVSHIPSASELSKLRQVLCYDGYLTPQNPSNGHHCIGASYHRGEADMRYSDADQAQ 536

Query: 544 NAQKLIHCLPEQTWPLEVDVSGNQSRQGVRCVSRDHLPFVGNVGEFSKITEQYRDLA-QQ 602
           N Q+LI C P+  W  EVDVS   +R GVRC +RDHLP  GNV ++    E Y+DLA  +
Sbjct: 537 NRQRLIDCFPDAAWAKEVDVSEGNARCGVRCATRDHLPMAGNVPDYDATLEAYQDLADNR 596

Query: 603 HQAEPIALYPQLYALVGLGSRGLSSAPLMAELLASQMCGDPMPLGVDLLEQLHPSRMWVR 662
             A    +YP+LY L GLGSRGL SAPL+AE+LA+QM  +P+PL    L  L+P+R+WVR
Sbjct: 597 DNAVSAPVYPELYMLGGLGSRGLCSAPLLAEVLAAQMSDEPIPLDRVTLAGLNPNRLWVR 656

Query: 663 KLRKGK 668
           KL KGK
Sbjct: 657 KLLKGK 662