Pairwise Alignments

Query, 674 a.a., bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC from Vibrio cholerae E7946 ATCC 55056

Subject, 687 a.a., tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC from Alteromonas macleodii MIT1002

 Score =  441 bits (1135), Expect = e-128
 Identities = 260/685 (37%), Positives = 385/685 (56%), Gaps = 39/685 (5%)

Query: 9   HAQLGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHNDDQRRFVIAETGF 68
           HAQ+ +N++GTPV+D FDDVYFSN +G+ ET++VF+  N L +RW       FVIAETGF
Sbjct: 5   HAQVHFNESGTPVADHFDDVYFSNDSGIDETQHVFVAGNDLAERWQQWRNPTFVIAETGF 64

Query: 69  GTGLNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAWPELAQFAQKL 128
           GTGLNFL   +AF  FR ANPD  LK L+FI+ EK+PL + D+ +A +A+P L   A  L
Sbjct: 65  GTGLNFLVAMRAFNEFRSANPDHPLKRLYFITTEKFPLPQQDMQRALEAFPALKDEADAL 124

Query: 129 HKHYPLAIPECQRIVLNDGLVTLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFAPSKNPE 188
              YP+ +  C R+  ++   TLDLW GD+ + LP+      GL+DAWFLDGFAPSKNP+
Sbjct: 125 ASLYPMGLEGCHRLHFDNHSTTLDLWIGDVHELLPQWHCPVDGLIDAWFLDGFAPSKNPD 184

Query: 189 MWNQNLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREMIAGSL--- 245
           MW   LF+ MA+L+K G T  TFT+AG V+RGL   GF +KK  GFG KR+M+ G     
Sbjct: 185 MWTDALFSQMARLSKTGTTFGTFTAAGIVKRGLAGVGFTIKKRNGFGRKRDMLTGVFNQD 244

Query: 246 SEKVPY---TNIAPEFRF--EATHGLQEVAIIGGGIASATLATTLARRGVAVTLYCADEK 300
           +E V +       P +R+  ++     +VA++G G+A+AT    L +RG++ TLY   + 
Sbjct: 245 NENVQHKLRLPAGPYYRYANDSLDKTSKVAVVGSGLAAATACLALVKRGISTTLYFDGDT 304

Query: 301 PAQGASGNRQGAVYPLLSGDHNAVSRVFAPAFLFARQWIEQAAEQI------NFDHDWCG 354
            A GASGN QG  YP L  + +  SR+ A +FL+AR+  +   E +      +  HD+CG
Sbjct: 305 LASGASGNPQGGFYPQLHSEASIASRIQAHSFLYARKAYDHTIEHVKACGLADVAHDFCG 364

Query: 355 VTQLMWDEKATDKLKSMLEGN-FPTQLVHGLSAEQTNQQVGVPVDKASVHYPLGGWLSPA 413
           V QL +++K  ++   +   + +P  L+  + +++ +    +P+  + ++  LGGWLSP 
Sbjct: 365 VIQLNFNDKVAERQNKLAAADVWPETLIKPVDSKEVSDIANLPLPYSGLYIGLGGWLSPP 424

Query: 414 ELTQGLIHLLEQQGKLTAH-YQTPIDALTWQPETQLWQLR------SGDTLMSHQCVVIA 466
           +L   +I    Q GKLT     T +     +   Q  Q+R        + +++   +++ 
Sbjct: 425 QLVTAMIEEALQSGKLTLKPNHTYVSHEAVETTKQRVQIRFNLDSAENEEVITADHLILT 484

Query: 467 SGHQFDSLSQTAELPLGKVKGQVSHIPTTETLSKINSVLCYDGYMTPVSQQNGYHCIGAS 526
            G    + S    L L  V+GQV  IPT   + ++N+VLC+ GYMTPV +  G H +G++
Sbjct: 485 LGAGAVNASDFDSLSLRPVRGQVEAIPTQMPIEQLNTVLCHKGYMTPVFE--GRHALGST 542

Query: 527 YDRQHL------DATFDPQAQHENAQKLIHCLPEQTWPLEVDVSGNQSRQGVRCVSRDHL 580
           Y +  L      D T    A HE A          T  ++      ++R   R  S DH 
Sbjct: 543 YVKNDLSTDARSDETEMNLATHEQAL-------ANTDIVQALQHDGKARAATRLGSPDHQ 595

Query: 581 PFVGNVGEFSKITEQYRDL--AQQHQAEPIALYPQLYALVGLGSRGLSSAPLMAELLASQ 638
           P VG +  F  + E Y  L   +   + P+     +  L  LGSRGL++APLMAE+L S 
Sbjct: 596 PVVGALHNFDSLKELYTMLGVGKPLTSAPVLPSSVVSTLTCLGSRGLTTAPLMAEVLVSS 655

Query: 639 MCGDPMPLGVDLLEQLHPSRMWVRK 663
           +C +P+PL  DLL  ++ SR   R+
Sbjct: 656 LCKEPLPLSNDLLNAVNTSRFMTRE 680