Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., HTH-type transcriptional regulator CynR from Xanthobacter sp. DMC5

 Score =  208 bits (529), Expect = 1e-58
 Identities = 113/290 (38%), Positives = 172/290 (59%), Gaps = 4/290 (1%)

Query: 1   MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEA 60
           M++R LR FVE+V Q  F+ A++ L  TQPT+SK ++ LE EL  PLL R G R  LT A
Sbjct: 1   MELRTLRAFVEVVRQGGFSPAAKVLNATQPTVSKAVKQLEDELGVPLLDRIGHRSQLTAA 60

Query: 61  GEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPM-VGHVYARLFRQYRQTYPNV 119
           GEIVY+RA  +L + + L AEL DL  L RG LRLG+PP+    ++A LF  +R  YP +
Sbjct: 61  GEIVYRRALTLLAEREGLVAELEDLRGLRRGSLRLGLPPLGASTLFAPLFAVFRSRYPGI 120

Query: 120 ELTVVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPIFAVVPDIPLWRSLT 179
           E+ + E+G +++E+ +L+G++++A ++L      D   V  +  P+ AV+P         
Sbjct: 121 EIRLTEHGSKRLEEMLLEGEVELAGSLLPAKDGFDGQAVRCE--PLMAVLPVSHPLAGRE 178

Query: 180 TLTWAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSGVGVCF 239
            +T A ++  PF LF   F L+  +   C   G++PQVAARS Q DF+V +  +G+GV F
Sbjct: 179 RVTIADLADFPFILFEGGFALNQVLEDACARNGFSPQVAARSGQIDFIVEIAGAGLGVAF 238

Query: 240 LPAPLCQRIQGDGVLIYPIT-PAIDWRLGVVWHRERYVSKTAEAWIALCR 288
           LP  +  + +   V +  +  P  +W + +VW +  Y+S  A AW+ L R
Sbjct: 239 LPKTIAYQRRTPAVRLSELAEPGTEWHMAIVWRKGSYLSHAARAWLELTR 288