Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  106 bits (264), Expect = 7e-28
 Identities = 78/245 (31%), Positives = 119/245 (48%), Gaps = 8/245 (3%)

Query: 4   RALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEAGEI 63
           R LRYFVE+ +  SF+ A+ERLFV Q  +S+ I+ LE +L+ PL  R  R+  LT AGE 
Sbjct: 5   RQLRYFVEIADSGSFSAAAERLFVAQSALSRQIKELETQLQTPLFERTARQPRLTAAGEA 64

Query: 64  VYQRAQQILTQMQQLDAELTDLNQLHRGHLRL---GIPPMVGHVYARLFRQYRQTYPNVE 120
            Y RA+ +L+++ +     T +    RG LRL      PM G +   +   + +  P V 
Sbjct: 65  FYPRARNLLSELLKASEMATQVGNGERGTLRLSHSSTVPMSGPLLQGI-STWLERCPGVS 123

Query: 121 LTVVEYGGRKIEQAILDGDIDVAVTMLSP-NQHPDLNTVAL-DHYPIFAVVPDIPLWRSL 178
           + +V+       + I DG +DV +  L    Q   +  V L     + AV P+  L RS 
Sbjct: 124 MDIVKLSSEAQLEQIADGRLDVGLLRLPVLRQREGVRVVPLYSEQLLLAVPPNHALARSH 183

Query: 179 TTLTWAQISQEPFYLFTH--EFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSGVG 236
           + +   Q+  E F    H     LS      C  AG+ P+ A   S+    + L+++G G
Sbjct: 184 SPIALEQLKDEAFISIPHPQRGGLSYLSAELCMRAGFFPKAARVMSRKTTQLQLIQAGFG 243

Query: 237 VCFLP 241
           +  LP
Sbjct: 244 IALLP 248