Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  109 bits (273), Expect = 6e-29
 Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 8/293 (2%)

Query: 1   MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEA 60
           MD+  L  F+ +    SF+ A ERL +TQP ISK I  LEQ+L+  L  R GR   LTEA
Sbjct: 1   MDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLKVRLFDRLGREVGLTEA 60

Query: 61  GEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVG-HVYARLFRQYRQTYPNV 119
           G  +  RA QIL  +      LT+L     G L L     +G H    + R + + YPNV
Sbjct: 61  GRALLPRAYQILNVLDDTRRALTNLTGEVSGRLTLATSHHIGLHRLPPVLRTFTREYPNV 120

Query: 120 ELTVVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPI-FAVVPDIPLWRSL 178
            L +         + IL G  +VAV  L+P+ H  +    +   P+ F V P+  L  S 
Sbjct: 121 ALDIQFLDSEVAYEEILHGRAEVAVITLAPDPHNLVRATPVWDDPLDFVVAPEHSL-ISN 179

Query: 179 TTLTWAQISQEPFYLFTHEFTLSDHI-HTCCQAAGYTPQVAARSSQWDFLVALVKSGVGV 237
            +++ A I+  P  +F    T + HI     +A G TP +A  ++  + +  +V  G+  
Sbjct: 180 GSVSLADIAGHP-AVFPGGNTFTHHIVSRLFEAQGLTPNIAMSTNYLETIKMMVSIGLAW 238

Query: 238 CFLPAPLCQRIQGDGVLIYPITPAIDWRLGVVWHRERYVSKTAEAWIALCRRQ 290
             LP  +    Q   + +  I   +  +LG + H ER +S  A A+++L   Q
Sbjct: 239 SVLPRTMLDE-QVASIALPGI--QLSRQLGYIVHTERTLSNAARAFMSLLDAQ 288