Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  110 bits (275), Expect = 4e-29
 Identities = 80/291 (27%), Positives = 141/291 (48%), Gaps = 12/291 (4%)

Query: 1   MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEA 60
           M +R +RY + +   ++FT+A+E L V+QPT+S+ I+ LE  L  PLL R GR   LT+A
Sbjct: 1   MLLRHIRYLLAVAEHRNFTRAAEALHVSQPTLSQQIKQLEDTLGAPLLDRSGRSVRLTDA 60

Query: 61  GEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGI-PPMVGHVYARLFRQYRQTYPNV 119
           GE   + A+  L  +Q     + D+  L RG+LRL + P    ++   L  Q+ Q +P +
Sbjct: 61  GETYVRFARLALQDLQAGTRAMHDVQDLSRGNLRLAMTPTFTAYLVGPLLAQFNQRHPGI 120

Query: 120 ELTVVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPIFAVV-PDIPLWRSL 178
            +++ E    ++E A+ +  +D+ +     +  PD+    L    +  VV  + P   S 
Sbjct: 121 TVSIEELTQDRMETALAEDALDIGIGFTGEHL-PDIECEGLFVETLSGVVGANHPGLDSR 179

Query: 179 TTLTWAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSGVGVC 238
             LT      +P  L    F    +I   C+  G  P +A  ++    ++ +V+S     
Sbjct: 180 QWLT------QPLVLLNQGFATRRYIDDYCRTQGINPVIAMEANSISAIIEIVRSTALAT 233

Query: 239 FLPAPLCQRIQGDGVLIYPITPAIDWR-LGVVWHRERYVSKTAEAWIALCR 288
            LP+ + Q     G+    I+PA+  R + ++  +  Y S    A++AL +
Sbjct: 234 LLPSAIAQ--AQPGLNAVAISPALPQRTVALLSRKGAYRSAACRAFVALIK 282