Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., Transcriptional regulator ligR, LysR family from Variovorax sp. SCN45

 Score =  103 bits (257), Expect = 5e-27
 Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 8/294 (2%)

Query: 1   MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEA 60
           MD++ L YF+ +    SFT+AS  + + QP +S+ +R LE EL Q LL R GR    T+A
Sbjct: 1   MDLKQLEYFIRVAELGSFTRASTVIDIAQPALSRQVRQLEVELRQNLLVRNGRGVVPTDA 60

Query: 61  GEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMV-GHVYARLFRQYRQTYPNV 119
           G+ + +  + IL Q+++   ++  +     G + +G+PP V G +   L R  R+  P+ 
Sbjct: 61  GKRLLEHGRGILHQVERAKEDMGRMRGALAGRVAVGLPPSVAGVLTVPLVRSVRERLPDA 120

Query: 120 ELTVVEYGGRKIEQAILDGDIDVAVTM-LSPNQHPDLNTVALDHYPIFAVVPDIPLWRSL 178
            L++ E     +++++L G +D+A+     P+   D  TV  +   + + +      R  
Sbjct: 121 ALSITESLSTAMQESLLTGRLDIALLYNPQPSTDVDSETVLEEELFLVSAIKGTGRGRRG 180

Query: 179 TTLTWAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSGVGVC 238
             L  AQ++ +P  + T    +   +     A G  P +A        ++ALV  G G  
Sbjct: 181 APLALAQLADQPLVIPTRPNAIRMLVEAQLGAIGRRPSIALEIDGVPAILALVADGAGHA 240

Query: 239 FL---PAPLCQRIQGDGVLIYPIT-PAIDWRLGVVWHRERYVSKTAEAWIALCR 288
            L      + +R Q     I PI  P +  RL +    +R V++T  A   L R
Sbjct: 241 VLSRNAVAIAERSQ--RYAIRPIAEPGLRSRLALAASSQRPVTRTQRAMGELLR 292