Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Transcriptional regulator CidR, LysR family from Sphingobium sp. HT1-2

 Score =  180 bits (456), Expect = 4e-50
 Identities = 110/295 (37%), Positives = 161/295 (54%), Gaps = 6/295 (2%)

Query: 1   MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEA 60
           M+ R LR F E+V    F++A+  L  TQ TISK ++ LE EL   LL R G R  +T A
Sbjct: 3   MEFRLLRSFTEVVRCGGFSQAARSLASTQSTISKAVKQLENELGTILLDRSGHRCVMTPA 62

Query: 61  GEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVGHV--YARLFRQYRQTYPN 118
           GE+VY+R  ++L     + AEL ++  L RG LRLGI P VG++  +A +   YR+ YP 
Sbjct: 63  GEVVYRRGIKLLADRDDVLAELDEIRGLQRGVLRLGI-PSVGNIKLFAPVVCTYRERYPQ 121

Query: 119 VELTVVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPIFAVVPDIPLWRSL 178
           +EL ++E+G  ++E+ +  GDID+A  +L P Q PD     +   PI A++  +      
Sbjct: 122 IELRLIEHGSNQLEKHLRAGDIDIA-GILEP-QSPDFEWEPIRSKPIVALLSSVHPLSRC 179

Query: 179 TTLTWAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSGVGVC 238
            +L    +   PF LF   F L   I    + AG+ P VA  SSQ DF++ LV + VGV 
Sbjct: 180 GSLKLTDLRDVPFVLFDLGFRLHGMILNASRKAGFEPTVAVTSSQIDFMIELVSTNVGVA 239

Query: 239 FLPAPLCQRIQGDGVLIYPITPA-IDWRLGVVWHRERYVSKTAEAWIALCRRQNR 292
           FLP+ +       G++  P+  A + W +G  W R  Y+S    AW+ L R  +R
Sbjct: 240 FLPSEIVDEKHLQGIVSVPLDEAELAWVMGHAWRRNAYLSDATVAWMKLMRETSR 294