Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  106 bits (265), Expect = 6e-28
 Identities = 87/301 (28%), Positives = 152/301 (50%), Gaps = 18/301 (5%)

Query: 1   MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEA 60
           M++R LRYF+ +  +  F +A+++L ++QP +S+ I+ LEQEL   L  R  RR  L+EA
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEA 60

Query: 61  GEIVYQRAQQILTQMQQLDAELTDLNQL-HRGHLRLGI---PPMVGHVYARLFRQYRQTY 116
           G +  + A+Q+L Q+++  A++    QL   G +++G     P    +  +    +RQ +
Sbjct: 61  GRLFLEEARQVLAQVEKA-ADVARRAQLGELGEMKIGFTSSAPFTSKI-PKAIHAFRQRF 118

Query: 117 PNVELTVVEYGGRKIEQAILDGDIDVAVTMLSPNQHPD-LNTVALDHYPIFAVV-PDIPL 174
           P V L + E   R + + + D  I+V   ++ P   P+ L    L   P+ AV+    PL
Sbjct: 119 PAVHLNLKEMSSRDVAEGVFDESIEVG--LMRPMPLPEGLVATELFREPLVAVINASHPL 176

Query: 175 WRSLTT-LTWAQISQEPFYLFTHEFTLSDH--IHTCCQAAGYTPQVAARSSQWDFLVALV 231
                  +  A ++ EPF  F   +    H  + +  + AG++P  A  + +   ++ LV
Sbjct: 177 AEGTEQGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLV 236

Query: 232 KSGVGVCFLPAPLCQRIQGDGVLIYPITPAIDWRLGVVW--HRERYVSKTAEAWIALCRR 289
            +G+GV  LPA   QR++ +GV+   +    +  +  VW   RER  S  A+A+  L   
Sbjct: 237 SAGLGVSVLPASF-QRMRIEGVVYRTLLD--EEAMTAVWLVQRERGHSVMAKAFAELLTG 293

Query: 290 Q 290
           Q
Sbjct: 294 Q 294