Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., transcriptional regulator CynR from Escherichia coli ECRC62

 Score =  111 bits (277), Expect = 2e-29
 Identities = 75/271 (27%), Positives = 125/271 (46%), Gaps = 4/271 (1%)

Query: 4   RALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEAGEI 63
           R + YF+ +    SFT+A+  L V+QP +S+ IR LE+ L  PL  R GR   LT+AGE+
Sbjct: 4   RHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEV 63

Query: 64  VYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGI-PPMVGHVYARLFRQYRQTYPNVELT 122
             Q A + L ++      + D+  L RG LR+ + P    +    L   +   YP + L 
Sbjct: 64  WRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPGITLQ 123

Query: 123 VVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPIFAVVPDIPLWRSLTTLT 182
           + E    KIE  +   ++DV +   +P   P+L  + L    +  VV       +   + 
Sbjct: 124 LQEMSQEKIEDLLCRDELDVGIA-FAPVHSPELEAIPLLTESLALVVAQHHPLAACEQVA 182

Query: 183 WAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSGVGVCFLPA 242
            +++  E   L + EF   + I   C+ AG  PQV   ++    ++ L++       LPA
Sbjct: 183 LSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPA 242

Query: 243 PLCQRIQGDGVLIYPITPAIDWRLGVVWHRE 273
            +    Q DG+    + P +  R  V+  R+
Sbjct: 243 AIA--TQHDGLKAISLAPPLLERTAVLLRRK 271