Pairwise Alignments

Query, 229 a.a., LrgB family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  121 bits (303), Expect = 1e-32
 Identities = 72/215 (33%), Positives = 116/215 (53%)

Query: 8   LFCFLLTLLFYYASKFLYRRKRSLLLMPLLLAPLLLVIVVMMFHIPYQAYMADAHWLLWL 67
           LF   +TL  Y      + + R + L P+L++ LL++ V++   + Y  Y      +  L
Sbjct: 17  LFGIGITLGAYQLVLAGFEKTRWIFLQPVLVSMLLVIGVLISCGLSYAEYRKSTEIMGIL 76

Query: 68  LGPATVAFAVPVYDNRALLRQHWLSLSVGVVVSVLVAISSTVLLARWLNLPDLLQRSLAM 127
           LGPATVA AVP+Y N   +RQ +  +   +V+  ++A    VLL  W      +  ++A 
Sbjct: 77  LGPATVALAVPLYLNLRRIRQLFWPIFTTLVIGGVLATGLCVLLGWWFGAEHRMLMTMAP 136

Query: 128 RSITTPFAVEATKSIGGQSDLTALFVVLTGVIGMAVGEIILTVLSIRSRLGKGASLGASA 187
           +S+T+P A+   + IGG + L A+FV++TGVIG  +G   L+ L + S   +G +LG +A
Sbjct: 137 KSVTSPIAMLVAEQIGGVAALAAVFVLITGVIGAMIGPAYLSRLGVHSPEARGMALGMTA 196

Query: 188 HGAGTAKAYQIGNSEGVVSSVVMMLAGMVTVVIAP 222
           H  GT+ A Q     G  +++ M L G+ T V  P
Sbjct: 197 HAVGTSVALQESEECGAFAALAMSLMGVATAVFLP 231