Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., 8-methylmenaquinol:fumarate reductase flavoprotein subunit from Xanthobacter sp. DMC5

 Score =  235 bits (599), Expect = 4e-66
 Identities = 190/565 (33%), Positives = 278/565 (49%), Gaps = 49/565 (8%)

Query: 3   IPVRSFDAVVIGAGGAGMRAALQISEQG----LTCA---LLSKVFPTRSHTVSAQGGITV 55
           + +R  D +++G+GGAG+ AAL   +      +T A   L+ K   TR      QGG  V
Sbjct: 5   VAIRETDVLILGSGGAGLFAALHTKKAAPHLDVTVAVKGLIGKCGCTRM----VQGGYNV 60

Query: 56  ALGNSHKDDWQWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELE-RMGLPFSRFENGTI 114
           AL     D  + H  DTV+G  ++ DQ+    +       + ELE  +G  F R  +G++
Sbjct: 61  ALAPG--DSVERHFMDTVEGGKWLNDQDLAWTLVTEAQVRIRELETELGCFFDRNPDGSV 118

Query: 115 YQRPFGGQSKEFGGEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQD 174
           +Q+ F GQ+ +       RT    D TG  +++ L +Q  +       +  ALDL+   D
Sbjct: 119 HQKAFAGQTFD-------RTVHKGDLTGIEIINRLMEQVWRRDVNRMEDHRALDLIPAAD 171

Query: 175 GAVL-GCTAICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPM 233
           G+ L G   + M TG      A+A +LATGG   +Y   T +   + DG+ MALRAG+ +
Sbjct: 172 GSGLAGVLMLDMRTGVPVLVNARAVLLATGGGPTMYKYHTPSGDKSCDGLAMALRAGLAL 231

Query: 234 QDMEMWQFHPTG-IAGAGVLVT-----EGCRGEGGYLLNKDGERFMERYAPNAKDLAGRD 287
           +DMEM QFHPTG +AG G  +T     EG RG GG+L ++ G RFM  Y P   + A RD
Sbjct: 232 RDMEMVQFHPTGLLAGPGTRMTGTVLEEGLRGAGGWLTDRTGARFMHLYDPRG-ERATRD 290

Query: 288 VVARSMMIEIREGRGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPI 347
           +V+RS+M  IR+G       G HI  ++ HLG D +     G+ E        D     +
Sbjct: 291 IVSRSIMRRIRDGY-ATAHGGVHI--EMGHLGPDHVRKTFKGMVERCAD-CGFDLAGGRV 346

Query: 348 PVIPTCHYMMGGVPTQVS-GQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLL 406
            VIPT HYMMGGV    + G A+ +           L+A GE     VHGANRLGGN + 
Sbjct: 347 EVIPTAHYMMGGVVFGGNCGTAMPR-----------LYAAGEDTG-GVHGANRLGGNGVA 394

Query: 407 DLVVFGRATGLHLG-ETLRAQAEARPATASDIEASLARTMRWENSKGGEDPVVIRKDLQR 465
           +  VFG   G  +  E  R +A A P  A+ +E +L R       +   D   IR+ L  
Sbjct: 395 NSTVFGGIAGDAMAREVERGRALADPDPAA-MEHALERAFS-PLGRDARDLPAIREALYE 452

Query: 466 CMQNNFSVFREGKAMAEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFS 525
            M ++  + R  + +      L  + + +  A   D    +N   ++ L L+NL+  + +
Sbjct: 453 AMWDDVGILRTAQGLKRAQATLGSLGDAVSRAGAPDGDRRYNLTWMDRLNLENLVLVSQA 512

Query: 526 TAVAANYRTESRGAHARFDYPERDD 550
              AA  R +SRGAH R D+PE  D
Sbjct: 513 ITAAALAREDSRGAHFREDFPETSD 537