Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 590 a.a., succinate dehydrogenase from Pseudomonas simiae WCS417

 Score =  807 bits (2085), Expect = 0.0
 Identities = 401/588 (68%), Positives = 470/588 (79%), Gaps = 3/588 (0%)

Query: 3   IPVRSFDAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSH- 61
           IP  SFDA++IG GGAGMRAALQ+++ G   A+++KVFPTRSHTVSAQGGIT A+ ++  
Sbjct: 4   IPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIASADP 63

Query: 62  KDDWQWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGG 121
            DDW+WHMYDTVKGSDYIGDQ+AIEYMC+ GP +V EL+ MGLPFSR E G IYQRPFGG
Sbjct: 64  NDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTEQGRIYQRPFGG 123

Query: 122 QSKEFG-GEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQDGAVLGC 180
           QSK++G G QAART AA+DRTGHALLHTLYQ N+K  TT  +E+YA+DLVKN  G  +G 
Sbjct: 124 QSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNAQGEFVGV 183

Query: 181 TAICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQ 240
            AIC+ETGE  Y +AKATVLATGGAGRIYASTTNA INTGDGVGMALRAGVP+QD+EMWQ
Sbjct: 184 IAICIETGETTYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQ 243

Query: 241 FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREG 300
           FHPTGIAGAGVLVTEGCRGEGGYL+NK GERFMERYAPNAKDLAGRDVVARSM+ EI  G
Sbjct: 244 FHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEIIAG 303

Query: 301 RGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGV 360
            GC GP G H+ LKLDHLG +VL SRLPGICELS+TFAHVDPV  P+PV+PTCHYMMGGV
Sbjct: 304 NGC-GPNGDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMGGV 362

Query: 361 PTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG 420
           PT + GQAI Q++ G+D  + GLFA GE+A VSVHGANRLGGNSLLDLVVFGRA GLHL 
Sbjct: 363 PTNIHGQAITQNAEGEDEIIHGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHLE 422

Query: 421 ETLRAQAEARPATASDIEASLARTMRWENSKGGEDPVVIRKDLQRCMQNNFSVFREGKAM 480
           + L    E   AT ++IEA+LAR         GED   +R++LQ CMQN F VFR G+ M
Sbjct: 423 KALTDGIEYDDATDANIEAALARLNALNERTDGEDVATLRRELQSCMQNYFGVFRTGEYM 482

Query: 481 AEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAH 540
            +G+ +L  +R+R+ N  + DKS  FNT RIE LEL NL+E A +TA+AA  R ESRGAH
Sbjct: 483 QKGIAQLADLRKRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRGAH 542

Query: 541 ARFDYPERDDENWLCHSIYNPETEQMSKREVNMTPVYRDPFPPKVRTY 588
           AR D+ +RDDENWLCH++Y P  ++++KR VN +P     F PK+RTY
Sbjct: 543 AREDFEDRDDENWLCHTLYFPGDKRVTKRAVNFSPKTVPTFEPKIRTY 590