Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 602 a.a., Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1) from Variovorax sp. SCN45

 Score =  648 bits (1671), Expect = 0.0
 Identities = 321/596 (53%), Positives = 419/596 (70%), Gaps = 11/596 (1%)

Query: 3   IPVRSFDAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHK 62
           I  R FD V++GAGG+GMRA+LQ++  GL  A+LSKVFPTRSHTV+AQGG+  +LGN  +
Sbjct: 8   ITKRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGVGASLGNMSE 67

Query: 63  DDWQWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGGQ 122
           D+W +H YDT+KGSD++GDQ+AIE+MC+  P+ V ELE  G+PF R  +GTIYQRPFGG 
Sbjct: 68  DNWHYHFYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIYQRPFGGH 127

Query: 123 SKEFGGEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQDGAVLGCTA 182
           +  +G +   R  AAADRTGHA+LHTLYQ+NV+ +T  F EW ALDL+++++G V+G TA
Sbjct: 128 TANYGEKPVQRACAAADRTGHAMLHTLYQKNVEARTQFFVEWMALDLIRDEEGDVVGVTA 187

Query: 183 ICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQFH 242
           + METG++   +AK  +LATGGAGRI+ ++TNA INTGDG+GMA R+G+P+QDME WQFH
Sbjct: 188 LEMETGDLHILQAKTVLLATGGAGRIFQASTNAFINTGDGLGMAARSGIPLQDMEFWQFH 247

Query: 243 PTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREGRG 302
           PTG+AGAGVL+TEGCRGEG  LLN +GERFMERYAP  KDLA RD V+RSM  EI+EGRG
Sbjct: 248 PTGVAGAGVLLTEGCRGEGAILLNSNGERFMERYAPTLKDLAPRDFVSRSMDQEIKEGRG 307

Query: 303 CDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGVPT 362
           C GP   ++ LKLDHLG D +  RLP + E+   FA+VD  KEPIPV+PT HY MGG+PT
Sbjct: 308 C-GPNKDYVLLKLDHLGADTIHKRLPSVYEIGVNFANVDITKEPIPVVPTIHYQMGGIPT 366

Query: 363 QVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGET 422
            + GQ + Q        V GL+A GE + VSVHGANRLG NSLLDL+VFGRA G H+ E 
Sbjct: 367 NIHGQVVVQKGEDNSAVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAGNHIVEF 426

Query: 423 LRAQAEARPATASDIEASLARTMRWENSKGGEDPVVIRKDLQRCMQNNFSVFREGKAMAE 482
                E +P      + +L R  R E + GGE    +  +++  MQ + +VFR+  +M E
Sbjct: 427 ADKLKEHKPLPNDAADRTLERLNRLEATTGGEYAQDVAGEIRAVMQQHAAVFRKQASMDE 486

Query: 483 GLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHAR 542
           G+ ++  +RER+K   L DKS  FNT RIE LE+DNL+E A +T V+A  R E RGAH  
Sbjct: 487 GVVKIAAVRERVKAIGLKDKSKVFNTARIEALEVDNLIEVAQATMVSAAARKECRGAHTV 546

Query: 543 FDYPE----------RDDENWLCHSIYNPETEQMSKREVNMTPVYRDPFPPKVRTY 588
            DY            RDD NW+ H+++  +  ++S + V + P+     PPKVRT+
Sbjct: 547 EDYERPADDPVAPLGRDDANWMKHTLWYSDDNRLSYKPVKLQPLTVASVPPKVRTF 602