Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  398 bits (1023), Expect = e-115
 Identities = 238/600 (39%), Positives = 350/600 (58%), Gaps = 45/600 (7%)

Query: 9   DAVVIGAGGAGMRAALQISEQGLTC--ALLSKVFPTRSHTVSAQGGITVALGNSHKDDWQ 66
           D  +IGAGGAG+RAA+  ++       AL+SKV+P RSHTV+A+GG + A+   H D + 
Sbjct: 7   DLAIIGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGG-SAAVAQDH-DSFD 64

Query: 67  WHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGGQSKEF 126
           +H +DTV G D++ +Q+ ++Y   + P  + +LE+ G P+SR  +G++  R FGG   E 
Sbjct: 65  YHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLEQWGCPWSRRPDGSVNVRRFGGMKIE- 123

Query: 127 GGEQAARTAAAADRTGHALLHTLYQQNVKH-KTTIFSEWYALDLVKNQDGAVLGCTAICM 185
                 RT  AAD+TG  +LHTL+Q +++  +   F E + LD++ + D    G  A+ M
Sbjct: 124 ------RTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DNHARGLVAMNM 176

Query: 186 ETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTG 245
             G +   +A A V+ATGGAGR+Y   TN  I TGDG+GMAL  GVP++DME  Q+HPTG
Sbjct: 177 MEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTG 236

Query: 246 IAGAGVLVTEGCRGEGGYLLNKDGERFMERYA---------PNAK--DLAGRDVVARSMM 294
           + G+G+L+TEGCRGEGG L+NK+G R+++ Y          P  K  +L  RD V+++  
Sbjct: 237 LPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFW 296

Query: 295 IEIREGRGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCH 354
            E R+G     P G  + L L HLG   L  RLP ICEL++ +  VDPVKEPIPV PT H
Sbjct: 297 HEWRKGNTISTPRGDVVHLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAH 356

Query: 355 YMMGGVPTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRA 414
           Y MGG+ T  + ++           V+GLFA GE +SV +HGANRLG NSL +LVVFGR 
Sbjct: 357 YTMGGIETDQNCES----------RVKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRL 406

Query: 415 TGLHLGETLRAQAEARPATASDIEASLA----RTMRWENSKGGEDPVVIRKDLQRCMQNN 470
            G    + +   A A  A ++ ++A +A    R     N +G E+   IR ++   M+  
Sbjct: 407 AG---EQAMERAATAGAANSAALDAQVADIEQRLKNLVNQEGNENWSKIRDEMGLSMEEG 463

Query: 471 FSVFREGKAMAEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTAVAA 530
             ++R  + M + +++L  ++ER K   ++D S+ FNT  +  +EL + +  A   A +A
Sbjct: 464 CGIYRTPELMQKTVDKLAELQERFKRVRISDTSSVFNTDLLYTIELGHGLNVAECMAHSA 523

Query: 531 NYRTESRGAHARFD--YPERDDENWLCHSIYNPETEQMSKREVNMTPVYRDPFPPKVRTY 588
             R ESRGAH R D    ERDD N+L H++   + +  ++ E +   +     PP  R Y
Sbjct: 524 LARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEYSDVKI--TTLPPAKRVY 581