Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., succinate dehydrogenase subunit A (EC 1.3.5.1) from Enterobacter asburiae PDN3

 Score =  397 bits (1020), Expect = e-115
 Identities = 240/600 (40%), Positives = 347/600 (57%), Gaps = 45/600 (7%)

Query: 9   DAVVIGAGGAGMRAALQISEQGLTC--ALLSKVFPTRSHTVSAQGGITVALGNSHKDDWQ 66
           D  VIGAGGAG+RAA+  ++       AL+SKV+P RSHTV+A+GG + A+   H D ++
Sbjct: 7   DLAVIGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGG-SAAVAQDH-DSFE 64

Query: 67  WHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGGQSKEF 126
           +H +DTV G D++ +Q+ ++Y   + P  + +LE+ G P+SR  +G++  R FGG   E 
Sbjct: 65  YHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLEQWGCPWSRRPDGSVNVRRFGGMKIE- 123

Query: 127 GGEQAARTAAAADRTGHALLHTLYQQNVKH-KTTIFSEWYALDLVKNQDGAVLGCTAICM 185
                 RT  AAD+TG  +LHTL+Q +++  +   F E + LD++ + DG   G  A+ M
Sbjct: 124 ------RTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGQARGLVAMNM 176

Query: 186 ETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTG 245
             G +   +A A V+ATGGAGR+Y   TN  I TGDG+GMAL  GVP++DME  Q+HPTG
Sbjct: 177 MEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALGHGVPLRDMEFVQYHPTG 236

Query: 246 IAGAGVLVTEGCRGEGGYLLNKDGERFMERYA---------PNAK--DLAGRDVVARSMM 294
           + G+G+L+TEGCRGEGG L+NK+G R+++ Y          P  K  +L  RD V+++  
Sbjct: 237 LPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFW 296

Query: 295 IEIREGRGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCH 354
            E R+G     P G  + L L HLG   L  RLP ICEL++ +  VDPVKEPIPV PT H
Sbjct: 297 HEWRKGNTISTPRGDVVYLDLRHLGEKKLLERLPFICELAKAYVGVDPVKEPIPVRPTAH 356

Query: 355 YMMGGVPTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRA 414
           Y MGG+ T              +  ++GLFA GE +SV +HGANRLG NSL +LVVFGR 
Sbjct: 357 YTMGGIET----------DQQCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRM 406

Query: 415 TGLHLGETLRAQAEARPATASDIEASLARTMR-WENSKGGEDPVVIRKDLQRCMQNNFSV 473
            G    E      EA  A      A + + ++   N +G E+   IR ++   M+    +
Sbjct: 407 AGERAMERAATSGEANGAALDAQVADVEKRLKDLVNQEGNENWSKIRDEMGLSMEEGCGI 466

Query: 474 FREGKAMAEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTAVAANYR 533
           +R  + M + +++L  ++ER K   + D S+ FNT  +  +EL + +  A   A +A  R
Sbjct: 467 YRTPELMQKTVDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSALAR 526

Query: 534 TESRGAHARFD--YPERDDENWLCHSIYNPE---TEQMSKREVNMTPVYRDPFPPKVRTY 588
            ESRGAH R D    ERDD N+L H++   +   T ++   +V +T +     PP  R Y
Sbjct: 527 KESRGAHQRLDEGCTERDDVNFLKHTLAWRDANGTTRLDYSDVKITTL-----PPAKRVY 581