Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 602 a.a., anaerobic fumarate reductase catalytic and NAD/flavoprotein subunit from Escherichia coli BL21

 Score =  402 bits (1033), Expect = e-116
 Identities = 244/605 (40%), Positives = 348/605 (57%), Gaps = 55/605 (9%)

Query: 9   DAVVIGAGGAGMRAALQISEQGLTC--ALLSKVFPTRSHTVSAQGGITVALGNSHKDDWQ 66
           D  ++GAGGAG+RAA+  ++       AL+SKV+P RSHTV+A+GG + A+   H D ++
Sbjct: 7   DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGG-SAAVAQDH-DSFE 64

Query: 67  WHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGGQSKEF 126
           +H +DTV G D++ +Q+ ++Y   + P  + +LE  G P+SR  +G++  R FGG   E 
Sbjct: 65  YHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIE- 123

Query: 127 GGEQAARTAAAADRTGHALLHTLYQQNVKH-KTTIFSEWYALDLVKNQDGAVLGCTAICM 185
                 RT  AAD+TG  +LHTL+Q +++  +   F E + LD++ + DG V G  A+ M
Sbjct: 124 ------RTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNM 176

Query: 186 ETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTG 245
             G +   +A A V+ATGGAGR+Y   TN  I TGDG+GMAL  GVP++DME  Q+HPTG
Sbjct: 177 MEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTG 236

Query: 246 IAGAGVLVTEGCRGEGGYLLNKDGERFMERYA---------PNAK--DLAGRDVVARSMM 294
           + G+G+L+TEGCRGEGG L+NK+G R+++ Y          P  K  +L  RD V+++  
Sbjct: 237 LPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFW 296

Query: 295 IEIREGRGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCH 354
            E R+G     P G  + L L HLG   L  RLP ICEL++ +  VDPVKEPIPV PT H
Sbjct: 297 HEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAH 356

Query: 355 YMMGGVPTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRA 414
           Y MGG+ T              +  ++GLFA GE +SV +HGANRLG NSL +LVVFGR 
Sbjct: 357 YTMGGIET----------DQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRL 406

Query: 415 TGLHLGETLRAQAEARPATASD-----IEASLA----RTMRWENSKGGEDPVVIRKDLQR 465
            G         QA  R ATA +     IEA  A    R     N  GGE+   IR ++  
Sbjct: 407 AG--------EQATERAATAGNGNEAAIEAQAAGVEQRLKDLVNQDGGENWAKIRDEMGL 458

Query: 466 CMQNNFSVFREGKAMAEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFS 525
            M+    ++R  + M + +++L  ++ER K   + D S+ FNT  +  +EL + +  A  
Sbjct: 459 AMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAEC 518

Query: 526 TAVAANYRTESRGAHARFD--YPERDDENWLCHSIYNPETEQMSKREVNMTPVYRDPFPP 583
            A +A  R ESRGAH R D    ERDD N+L H++   + +  ++ E +   +     PP
Sbjct: 519 MAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEYSDVKI--TTLPP 576

Query: 584 KVRTY 588
             R Y
Sbjct: 577 AKRVY 581