Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 613 a.a., succinate dehydrogenase flavoprotein subunit from Agrobacterium fabrum C58

 Score =  554 bits (1427), Expect = e-162
 Identities = 297/590 (50%), Positives = 385/590 (65%), Gaps = 17/590 (2%)

Query: 7   SFDAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDDWQ 66
           S+D +V+GAGGAG+RA L ++EQG   A ++KVFPTRSHTV+AQGGI  +L N   D WQ
Sbjct: 20  SYDVIVVGAGGAGLRATLGMAEQGFRTACITKVFPTRSHTVAAQGGIAASLTNMTPDCWQ 79

Query: 67  WHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGGQSKEF 126
           WH+YDTVKGSD++GD +A++Y+    P++V ELE  G+PFSR   G IYQRPFGG  + +
Sbjct: 80  WHLYDTVKGSDWLGDVDAMQYLAMEAPKAVYELEHYGVPFSRNAEGKIYQRPFGGHMQNY 139

Query: 127 G-GEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQDGAVLGCTAICM 185
           G G    RT AAADRTGHA+LHTLY Q++++    F E++ALDL+   DG   G  A  +
Sbjct: 140 GEGPPVQRTCAAADRTGHAILHTLYGQSLRNNAEFFIEYFALDLIMAPDGRCTGVVAWNL 199

Query: 186 ETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTG 245
           + G I  F AK  VLATGG GR Y S T+AH  TGDG GM  RAG+P+QDME  QFHPTG
Sbjct: 200 DDGTIHRFSAKMVVLATGGYGRAYFSATSAHTCTGDGGGMIARAGLPLQDMEFVQFHPTG 259

Query: 246 IAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREGRGCDG 305
           I GAG L+TEG RGEGGYL+N +GERFMERYAP+AKDLA RDVV+R M +EIREGRG  G
Sbjct: 260 IYGAGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASRDVVSRCMTMEIREGRGV-G 318

Query: 306 PWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGVPTQVS 365
               HI L LDHL   +L  RLPGI E ++ FA VD  +EPIPV+PT HY MGG+PT   
Sbjct: 319 KNKDHIFLHLDHLDPAILHERLPGISESAKIFAGVDVTREPIPVLPTVHYNMGGIPTNYW 378

Query: 366 GQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLRA 425
           G+ +  D++  +    GL A GE    SVHGANRLG NSL+DLVVFGRA  +   + +  
Sbjct: 379 GEVLNADANNPERIAPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAIRAAQVIDR 438

Query: 426 QAEARPATASDIEASLARTMRWEN---SKGGEDPVVIRKDLQRCMQNNFSVFREGKAMAE 482
            A   P  A DI A      R+++   + G     V+R  +QR MQ++ +VFR  +++  
Sbjct: 439 DA---PVPALDIAACDKIMERFDSLRYANGSTPTAVLRDKMQRAMQDDAAVFRTQESLES 495

Query: 483 GLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHAR 542
           G + L  I + L +  + D+S  +N+  +E LEL NLM  A +T   A  R ESRG+HAR
Sbjct: 496 GCQRLSAIWKELPDVKVTDRSMVWNSDLVETLELHNLMANAITTVYGAEARKESRGSHAR 555

Query: 543 FDYPE-----RDDENWLCHSI--YNPETE-QMSKREVNMTPVYRDPFPPK 584
            D+ +     RDD NW  H++   +PE + ++  R V+ T +  D   PK
Sbjct: 556 EDFVDGPFGGRDDVNWRKHTLAWVSPEGDVKLDYRPVH-TDLIADGIDPK 604