Pairwise Alignments

Query, 388 a.a., succinyl-CoA ligase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Succinate--CoA ligase [ADP-forming] subunit beta from Xanthobacter sp. DMC5

 Score =  404 bits (1038), Expect = e-117
 Identities = 205/396 (51%), Positives = 275/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57
           MN+HEYQAK L   FG PV  G      +EA  AA  +     VVK Q+HAGGRGK    
Sbjct: 1   MNIHEYQAKALLKSFGAPVSRGIPVLKVEEAEAAAKELGGPLWVVKSQIHAGGRGKGKFK 60

Query: 58  -------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110
                  GGV L  + E VK F  + LG+ LVT QT   G+ V+++ +EE S+I  E Y+
Sbjct: 61  EPEAGEKGGVRLAKSVEEVKEFVGQMLGRTLVTIQTGPAGKQVNRLYIEEGSDIEKEFYI 120

Query: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170
             +VDR T R+ F+ STEGG++IE+VA  TPE I   ++DP+ G Q + GR++A  LGL 
Sbjct: 121 SLLVDRVTSRVAFVVSTEGGMDIEEVAHSTPEKIVTFSVDPVTGVQGFHGRKIAKALGLS 180

Query: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPKLR 230
           G+  KQ  K+   L   F + D+A+LEINPL++T +GNL  LD K++ DSN+++R PKL 
Sbjct: 181 GELAKQAGKLAEVLYTAFVETDMAMLEINPLIVTKDGNLRVLDAKVSFDSNSLFRHPKLT 240

Query: 231 QMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290
           ++ D ++ED +E  A+K++L Y+ALDG +GCMVNGAGLAM T+DI+ L+G  PANFLDVG
Sbjct: 241 ELRDLTEEDEKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIQLYGESPANFLDVG 300

Query: 291 GGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350
           GGA +E+V  AFKII +D NVK +LVNIFGGI++CD+IA G+I AVK VG+ VP+VVRLE
Sbjct: 301 GGANEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIANGVIAAVKAVGLQVPLVVRLE 360

Query: 351 GTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAAE 386
           GTN E G++++ ESGL++I A  L DAAQK+VAA +
Sbjct: 361 GTNVEEGKQIIRESGLNVIPADDLDDAAQKIVAAVK 396