Pairwise Alignments

Query, 260 a.a., zinc ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., zinc ABC transporter permease from Pseudomonas simiae WCS417

 Score =  104 bits (260), Expect = 2e-27
 Identities = 78/253 (30%), Positives = 135/253 (53%), Gaps = 9/253 (3%)

Query: 8   SLLAGLGIAIIAGPLGSFVVWRRMAYFGDTLAHASLLGLALGFLLDINLYLALLVCCLG- 66
           +L+ GL +A    PLG F++ RRM+  GD +AH  L G ALGF        AL +  LG 
Sbjct: 20  ALIGGLVLACSTAPLGVFLILRRMSLIGDAVAHGILPGAALGFWFAGLSLPALTIGGLGA 79

Query: 67  ---MAAILVAMQKQKLIATDTLLGIMAHSALSLGMIAVSFLDNVRIDLMSYLFGDLLAIS 123
              MA +   + ++  +  D  L  +   +L+ G++ +  L   R+DL+  LFG  LA+ 
Sbjct: 80  GLSMAGLSAWITRRTGLREDASLAAIYPISLAAGVLILG-LAGKRLDLLHLLFGSALAVD 138

Query: 124 PSDLT-FIWFGVVTVSLIVY-LLWQPLLSTSVNEELAFVEGTNTDLMRLILMLLIGLVIA 181
            + LT  +W  V + SLI   ++++PLL  +++            L   + + L+ L + 
Sbjct: 139 GTTLTGMLW--VSSFSLIAMAVIYKPLLLDTLDPLFLQTVSRLGPLAHGLFLTLVVLNLV 196

Query: 182 VGMKFVGALIMGSLLIIPAATARRLSRTPEAMAFWAIGLGVLSVIGGLALSWHFDTPAGP 241
           +G + +GAL++  L+++PA  +R  SR    +   +  LG LSV  GL LS+++  P+GP
Sbjct: 197 IGFQAIGALMVVGLMMLPAIASRFWSRRLPVLIAVSAVLGCLSVWLGLLLSFYYSLPSGP 256

Query: 242 SVVVSAAVLFVLT 254
           ++V+ A   ++L+
Sbjct: 257 AIVLVAGAGYLLS 269