Pairwise Alignments

Query, 260 a.a., zinc ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  117 bits (292), Expect = 4e-31
 Identities = 82/257 (31%), Positives = 140/257 (54%), Gaps = 17/257 (6%)

Query: 8   SLLAGLGIAIIAGPLGSFVVWRRMAYFGDTLAHASLLGLALGFL--------LDINLYLA 59
           +L   L +AI  GP+G F++ RRM+  GD ++HA L G A+GFL        + I   + 
Sbjct: 18  ALAGALILAISCGPVGVFLMLRRMSLTGDAMSHAILPGAAVGFLFYGLEILPMTIGGLVV 77

Query: 60  LLVCCLGMAAIL-VAMQKQKLIATDTLLGIMAHSALSLGMIAVSFLDNVRIDLMSYLFGD 118
            LV  LG  A+    +QK+     D  L  +   +L+LG++ VS+  +  +DLM  LFG 
Sbjct: 78  GLVVALGAGAVSRFTVQKE-----DASLAALYLISLALGVLLVSWRGS-SVDLMHVLFGT 131

Query: 119 LLAISPSDLTFIWFGVVTVSLIVYL-LWQPLLSTSVNEELAFVEGTNTDLMRLILMLLIG 177
           +LA++   L  I  G+  V+L+V +  W+ LL+  ++             +  + + ++ 
Sbjct: 132 VLALNNEALGLIG-GICIVTLVVMITFWRALLAECLDPLFLRSVSNWGSPVHFLFLAIVV 190

Query: 178 LVIAVGMKFVGALIMGSLLIIPAATARRLSRTPEAMAFWAIGLGVLSVIGGLALSWHFDT 237
           L +  G + +G L+   L+++PAA +R  S     M F +IG+G++S   GL LS+H   
Sbjct: 191 LNLVGGFQALGTLLSVGLMMLPAAASRFWSNRVAPMCFISIGIGMVSCFAGLILSYHASL 250

Query: 238 PAGPSVVVSAAVLFVLT 254
           P+GP++V+SA V++ L+
Sbjct: 251 PSGPAIVLSAGVIYALS 267