Pairwise Alignments

Query, 262 a.a., Mn2+/Zn2+ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Sphingobium sp. HT1-2

 Score =  101 bits (252), Expect = 1e-26
 Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 19/226 (8%)

Query: 10  ICVDFEQRRVLDNIRLTLTKGNITTLIGPNGAGKSTLVKVILGLQSLSSGKII------- 62
           I   +++R VL ++ LT+ KG +  L+GPNGAGK+T    ++GL     G+II       
Sbjct: 44  IAKSYDKRVVLSDVSLTVGKGEVVGLLGPNGAGKTTCFYSVMGLVRPDQGRIILDGQDIT 103

Query: 63  -----RQSGIRIGYVPQKLKL--NDTLPLTVNRFLKLAG---RFSTQELSEALRLVGGEH 112
                R++ + +GY+PQ+  +    T+   +   L++A        ++L + L   G   
Sbjct: 104 GLPMYRRAILGLGYLPQETSIFRGLTVEQNIGAVLEMAEPNKAARAEKLEQLLDEFGLTR 163

Query: 113 LQSSDMHKLSGGETQRVLLARALLQRPDLLVLDEPAQGVDVQGQIDLYDLIHTLRNRFGC 172
           L+ S    LSGGE +R  +ARAL   P +++LDEP  G+D     D+ DL+  L+ R G 
Sbjct: 164 LRDSAAMALSGGERRRCEIARALAADPSIVLLDEPFAGIDPLSIADIRDLVKQLKTR-GI 222

Query: 173 AVLMVSHDLHLVMAKTDEV-ICLQHHVCCSGSPESIAKHPSYLAMF 217
            VL+  H++   +   D   I     V  +GSP  +  HP    ++
Sbjct: 223 GVLITDHNVRETLEIVDRACIIYSGQVLFAGSPTELVAHPDVRRLY 268