Pairwise Alignments

Query, 297 a.a., zinc ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., zinc ABC transporter substrate-binding protein from Pseudomonas sp. SVBP6

 Score =  198 bits (503), Expect = 1e-55
 Identities = 106/304 (34%), Positives = 165/304 (54%), Gaps = 8/304 (2%)

Query: 1   MATMLSRYFLLTVAALFAQSASAIEVLTSIKPIQMITYELMLGTGTPDVLLPSGASPHDY 60
           M+ + + +   T   + AQ+ + + VLTSIKP+Q I   +  G GTP+VLLP GASPH Y
Sbjct: 1   MSRIFALFVAFTATLVMAQAQAEVRVLTSIKPLQQIAAAVQDGVGTPEVLLPPGASPHHY 60

Query: 61  ALRPSDVKRIQQADLVIWFGQDLEPFMSKLLEGRTS-ALTLSQVPNLALREYGEEEQ-HE 118
           ALRPSDV+R+   +L+ W G D+E F+ ++L+ R+  ++ +  +  L LR +GE+   H+
Sbjct: 61  ALRPSDVRRVGDVELLYWIGPDMEGFLPRVLKTRSKPSVAVQGLAGLHLRHFGEDSHSHD 120

Query: 119 HDGHHHGH------YDPHFWLGIGPVGQVASAITAKLIELDADQQQQYQDNLVRFLANLA 172
            DG  H H       D H WL       +A+ + A L   D     +YQ NL  F   + 
Sbjct: 121 EDGDDHDHDHRPGSLDAHLWLSSVNARVIAAKMAADLSAADPANAARYQSNLKTFGERMD 180

Query: 173 EQDNTIGEKLKPVTTVPYYVFHDAYGYFEQHFALNNLGHFTVSPERKPGAKTLIAIKKTL 232
             D  + +++  ++  P++VFH+A+ YFE  + L + G F+V+ E +PGA+ + A++K L
Sbjct: 181 ALDARLKKRMAGISGKPFFVFHEAFDYFESAYGLKHTGVFSVAAEVQPGAQHVAAMRKRL 240

Query: 233 NDQLAKCVFSEPQFEPAIIETVVRGTSAKIGVLDPLGISIELQAGSYFAFLNSLAESYYA 292
            +    CVFSEP   P + ET+  G    +  LD LG +    A  Y   L +L      
Sbjct: 241 QEVGKTCVFSEPPLRPRLAETLTAGLPVTLAELDALGGTAPASARGYEQLLETLGNDLAG 300

Query: 293 CLSQ 296
           CL +
Sbjct: 301 CLEK 304