Pairwise Alignments

Query, 297 a.a., zinc ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., putative adhesin (VIMSS) from Escherichia coli BW25113

 Score =  244 bits (623), Expect = 2e-69
 Identities = 132/299 (44%), Positives = 182/299 (60%), Gaps = 13/299 (4%)

Query: 9   FLLTVAALFAQSASAIE--VLTSIKPIQMITYELMLGTGTPDVLLPSGASPHDYALRPSD 66
           F    AAL+  +  A +  V+ S+KP+  I   +  G    +VLLP GAS HDY+LRPSD
Sbjct: 9   FAALSAALWGGATQAADAAVVASLKPVGFIASAIADGVTETEVLLPDGASEHDYSLRPSD 68

Query: 67  VKRIQQADLVIWFGQDLEPFMSKLLEGRTSA--LTLSQV----PNLALREYGEEEQHEH- 119
           VKR+Q ADLV+W G ++E FM K +     A  +T++Q+    P L    +G+++ H+H 
Sbjct: 69  VKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQVTIAQLEDVKPLLMKSIHGDDDDHDHA 128

Query: 120 ----DGHHHGHYDPHFWLGIGPVGQVASAITAKLIELDADQQQQYQDNLVRFLANLAEQD 175
               + HHHG ++ H WL        A AI  KL+EL    + +   NL  F A LA  +
Sbjct: 129 EKSDEDHHHGDFNMHLWLSPEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQLASTE 188

Query: 176 NTIGEKLKPVTTVPYYVFHDAYGYFEQHFALNNLGHFTVSPERKPGAKTLIAIKKTLNDQ 235
             +G +L P+    Y+VFHDAYGYFE+ F L  LGHFTV+PE +PGA+ L  I+  L +Q
Sbjct: 189 TQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQ 248

Query: 236 LAKCVFSEPQFEPAIIETVVRGTSAKIGVLDPLGISIELQAGSYFAFLNSLAESYYACL 294
            A CVF+EPQF PA++E+V RGTS ++G LDPLG +I+L   SY  FL+ LA  Y +CL
Sbjct: 249 KATCVFAEPQFRPAVVESVARGTSVRMGTLDPLGTNIKLGKTSYSEFLSQLANQYASCL 307