Pairwise Alignments

Query, 1121 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., Helix-turn-helix domain from Enterobacter asburiae PDN3

 Score = 59.7 bits (143), Expect = 3e-13
 Identities = 58/199 (29%), Positives = 83/199 (41%), Gaps = 23/199 (11%)

Query: 935  VFSDFGAPIQNIDKTMVTLSGSSYPLEELVIRSGGVLHVLALKERNVIELAWPLATLPEL 994
            +FS FG   Q     +    G      EL      ++  L +  R     A+ L TL EL
Sbjct: 49   IFSSFGHLTQPSPDALSIHFGKQLLTIELQ-HDNTLVQQLKVARRGPRTGAFLLQTLTEL 107

Query: 995  ETIHKPEEGEQAAKVGIDEVE----------------KEWLSKVEKLIELHYSDPNFTTS 1038
            +   +P+E E A  V +  +                 +     + + IE H++    T  
Sbjct: 108  QM--QPDEQETAILVVLSLLSHCRDLLGSDIHTASRSRALFEAIRRFIEEHHASA-LTRE 164

Query: 1039 TAAQALYVSERSLQRRFKAATGKTFKESLNEVRLEKACQSLLSG--AKIAQVAFDCGFND 1096
            + AQA YVS   L   F+      F E L + RLE A Q LL G   KI  +A  CGF D
Sbjct: 165  SVAQAFYVSPNYLSHLFQKIGNVGFNEYLTQTRLEHARQ-LLKGYDLKIKDIAASCGFTD 223

Query: 1097 PSYFSQRFKHHFGLSPSQF 1115
             +YF + F+ H   SPS++
Sbjct: 224  SNYFCRLFRKHTERSPSEY 242