Pairwise Alignments
Query, 1121 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056
Subject, 1360 a.a., His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Y_Y_Y domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Two component regulator propeller./Bacterial regulatory helix-turn-helix proteins, AraC family. from Echinicola vietnamensis KMM 6221, DSM 17526
Score = 62.0 bits (149), Expect = 3e-13
Identities = 124/577 (21%), Positives = 231/577 (40%), Gaps = 70/577 (12%)
Query: 253 VLSIAETEKEYWIGTE-DGLFVYSFITGKIVQLESNNQDGYALLGKKIYAMVNDFQGGMW 311
++++A+ + + W+ T+ +GL V + K L+ L+ +Y + D QG W
Sbjct: 270 IMNVAD-DGQIWVATDGNGLLVLEKGSEKSYFLKEGTVPS-DLVSNAVYGLALDRQGRKW 327
Query: 312 IGTDKGIFYYSLFGQQFTRY-PAQALSNDGSKTPIGKIAAL-NSDGDYLAITAQGLYNFN 369
+GT +G ++ ++ R+ N + P I + + GD L + G
Sbjct: 328 VGTLRG--GVNILEKKQNRFVTVHNPDNLVNGLPSDFILSFCQTSGDSLWVGTDGGGVSI 385
Query: 370 FSDELRKHLIY------PGKV-NDFVIA----QEHLWIATEKGLVRYNLSRRSIDTP--- 415
+ + ++ Y PG + NDFV A + +LW+AT G V SR P
Sbjct: 386 WDRKRDRYTNYRHRSGKPGSLPNDFVTAIVERENNLWLATYGGGVCRYDSRADAFVPYTL 445
Query: 416 NLPLPLLQTAIQHLSLDSDGNLWGTSDYQIWSYSLSEKNYRDYGSEWMVKAFSPSRITLL 475
+ P + I L D G+LW + S E YR G + ++
Sbjct: 446 SNPEGMAHWYIWVLFKDRSGDLWAAT-------SNGEGLYRYNGQKDRFDFVDVGIYGII 498
Query: 476 AAVKDGIVIGTEHGAY--SLLEKQIRFDFSSHRYGEILQVAEDSSGHI------WLVGSY 527
+ +D +G Y + ++ D S + E++ + + LV +
Sbjct: 499 SMAQD------HNGDYWVGTFDHLVKLDLSVEQDHEVIDIGYPVRDIMSLGPEDLLVATE 552
Query: 528 GVFQWRKDQPEAVTVELIEENIQP-----LCIAESKQGMWLISTKGISYYRNQ-ELTKHF 581
G WR D + ++E P + + +W+ + KG++ + + E F
Sbjct: 553 GSGIWRFDSGQGTAKTYLQEEGLPNNSVLKMVGDRNGKIWMSTYKGLAKFDPEGEKFTSF 612
Query: 582 GAPYGLISNEFLSASCAVGEEQDNSSLIIGSQFGVVKTNT-EELAVSNLPNIQVTFSQVS 640
A GL SN+F + G D+ L G G + + + + P+I +T Q+
Sbjct: 613 FASDGLQSNQF---NYNAGIRLDDGKLAFGGIKGFNLIDPLHQKSEGSFPHIHLT--QLR 667
Query: 641 VN----HTTKLLGYRMSEPLKIAYGDS-ISFQFGALPSSRSQSLEYKLNDEQQWQRFDWA 695
VN H + + + L++ Y S +S F AL + + + Y + E +++ +
Sbjct: 668 VNNQPGHPDGKTIFALDK-LELPYDQSMVSLDFLALEYAHPEKIAYAYHMEGWDEKWHFV 726
Query: 696 ----LLNFDQLLPGKYRLKVRSANPTQRYRTEAL-FDFEVLQPWYMTSIALVGYVLSVLG 750
+ N+ +L G+Y VR+ N + + + +L PWY T A Y + V G
Sbjct: 727 KNSRMANYSKLREGEYTFHVRATNAQGEWSPQVVSLPISILPPWYRTWWAYGLYSVIVGG 786
Query: 751 LLALALWWRTRMILAANRKLKAQVELKTSQLRHQSKI 787
L + + ++ + KLK QV L R + ++
Sbjct: 787 LAGILVLYQRK-----QDKLKYQVSLSREMARREKEL 818
Score = 62.0 bits (149), Expect = 3e-13
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 1011 IDEVEKEWLSKVEKLIELHYSDPNFTTSTAAQALYVSERSLQRRFKAATGKTFKESLNEV 1070
+ + +KE++ K+ K+IE + + F+ A + +S L R+ K ATGKT E + V
Sbjct: 1234 LSKEDKEFIDKMVKVIEENLDNDGFSIQVLAVDMCMSHSMLYRKVKLATGKTVNEIIRFV 1293
Query: 1071 RLEKACQSLL-SGAKIAQVAFDCGFNDPSYFSQRFKHHFGLSPSQF 1115
RL +L+ + A++ + G++D YF ++F +G++PS F
Sbjct: 1294 RLRAIATTLITTDAQVNEAVSSAGWHDLKYFRKQFSQQYGMTPSAF 1339
Score = 42.7 bits (99), Expect = 2e-07
Identities = 66/297 (22%), Positives = 122/297 (41%), Gaps = 32/297 (10%)
Query: 213 IQKLYFSHKRRELLVGSKRGALVIDIENKRPPLDRIGSSHVLSIAETEKEY-WIGTEDGL 271
IQ + +E L G +R + I+ + ++ V +I + +K + WIGT DGL
Sbjct: 16 IQLVLGQDNAQERLTGYERNYIGIE--------SGLSNNAVTAIYQDKKGFVWIGTYDGL 67
Query: 272 FVYSFITGKIVQLESNNQDGYALLGKKIYAMVNDFQGGMWIGTDKGIFYYSLFGQQF-TR 330
Y + + +D +L+ +I ++ D + +W+GT +G+ Y +F R
Sbjct: 68 NRYDGY--DFLVFRNQPRDTSSLVHNRIVSIYGD-RNEVWVGTKRGLSVYDYHTGKFQAR 124
Query: 331 YPAQALSNDGSKTPIGKIAALNSDGDYLAITA-QGLYNFNFSDELRK-------HLIYPG 382
Y + K DG + TA QG+ L + Y
Sbjct: 125 YYEDPKTKRRHKLTANINHITGRDGKIVVATAGQGVMVRADGGPLSRVPLWDAGKRYYDY 184
Query: 383 KVNDFVIAQEHLWIATEKGLVRYNLSRRSIDTPNLPLPLLQ-TAIQHLSLDSDGNLWGTS 441
+ ++H A +G Y L+ R + + L + + LDS+GN+W S
Sbjct: 185 HAQGAAVDKDHNVWAFIQG---YGLAVRKEEDSCFKVVLKDIKSANCIELDSEGNIWIGS 241
Query: 442 DYQIWSYSLSEKNYRDYGSEWMVKAFSPSRITLLAAVKDG--IVIGTEHGAYSLLEK 496
DY + + + +K++ Y ++ + ++IT + V D I + T+ +LEK
Sbjct: 242 DYGLARFHVQQKDWYLYPAQ-----ITKNKITDIMNVADDGQIWVATDGNGLLVLEK 293