Pairwise Alignments
Query, 1121 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056
Subject, 1351 a.a., Signal transduction histidine kinase from Echinicola vietnamensis KMM 6221, DSM 17526
Score = 107 bits (268), Expect = 5e-27
Identities = 225/1003 (22%), Positives = 369/1003 (36%), Gaps = 212/1003 (21%)
Query: 166 YQLNSASKVVINDAQFLVSKWALATNVGVYLSDEQGFAHVKNS--GKH-FIQKL-----Y 217
YQ S + V ++D TNV L DE+G V NS G H F+ K Y
Sbjct: 169 YQAISKTNVNLHDNN--------TTNV---LVDEKGELWVSNSRLGVHKFLPKTKKFKQY 217
Query: 218 FSHKR-------------RELLVGSKR-GALVIDIENK--RPPLDRIGSSHVLSIAETEK 261
+H LL+G+K G V+D N +P L + + L I + +K
Sbjct: 218 LTHSEVIKAAVLQMEDHGNNLLLGTKDLGVWVMDKNNGHVKPLLTKAPNGKNLFIRDLQK 277
Query: 262 ----EYWIGTEDGLFVYSFITGKIVQLESNNQDGYALLGKKIYAMVNDFQGGMWIGTD-K 316
E WI TE GLF+Y K + N D Y++ IY + D +GGMWIGT
Sbjct: 278 ISENELWIATESGLFIYDLEKHKFKHFKENLNDPYSISDNAIYCISRDIEGGMWIGTYFG 337
Query: 317 GIFYYSLFGQQFTRYPAQALSNDGSKTPIGKIAALNSDGDYLAITAQGLYNFNFSDELRK 376
G+ + +F ++ SN S + + ++ GL ++ E
Sbjct: 338 GVNFLPNHPTKFKKHYPIPNSNTISGQRVREFEEGKDGTIWIGTEDAGLNQYDPESETYL 397
Query: 377 HLIYPGKVNDFVIAQEH--------LWIAT---EKGLVRYNLSRRSIDT----PNLPLP- 420
H + N H LWI T GL R NL+ I+T NL P
Sbjct: 398 HYLPNNSSNSLSYHNVHGLAKRENELWIGTVTFATGLNRMNLNTNKIETIPFHSNLDTPD 457
Query: 421 ---------------LLQTAIQHLSLDSD-----------------------GNLW-GTS 441
L T + L LD + GNLW GT
Sbjct: 458 DNEIHSILVDKNKQVWLGTVVGLLKLDEENNTVNSIDKIGNRFIYDMIEDHKGNLWLGTY 517
Query: 442 DYQIWSYSLSEKNYRDYGSEWMVKAFSP--SRITLLAAVKDGIVIGTEHGAYSLL-EKQI 498
+ Y+ + + R Y + P S I + + I I TE G + + EK
Sbjct: 518 SNGLVKYNPNTQEMRTYLPDPKNPNALPHYSVINIFQDSQKRIWIATEGGGFCIYNEKSD 577
Query: 499 RFDFSSHRYGE----ILQVAEDSSGHIWLVGSYGVFQWRKDQPEAVTVELIEENIQPLCI 554
F + G I ++ ED SGH+W+ S G+ ++ P+ L ++
Sbjct: 578 DFTVFNTDNGFPSNIIYKILEDISGHLWITCSRGLLEF---NPQTTEYRLFTKD------ 628
Query: 555 AESKQGMWLISTKGISYYRNQELTKHFGAPYGLISNEFLSASCAVGEEQDNSSLIIGSQF 614
G+ S +R ++ T +FG N F+S E + ++ +
Sbjct: 629 ----NGLMPYPFNYKSGFRAKDGTLYFGC-----LNGFISFDPREFEPYEYDPPVVFTGI 679
Query: 615 GVVKTNTEELAVSNLPNIQVT-FSQVSVNHTTKLLGYRMSEPLKIAYGDSISFQFGALPS 673
+ T +++ N +T S++++ H S+SF F AL
Sbjct: 680 QIFNTPVPIGGENSILNASITNTSEITLKHDQ----------------SSLSFDFAALSY 723
Query: 674 SRSQSLEYKLNDEQQWQRFD--WALL------NFDQLLPGKYRLKVRSANPTQRYR-TEA 724
+ S +L Y + + FD W L N+ L PG Y LK+++A+ + EA
Sbjct: 724 TASDALPY----AYKMEGFDKTWTYLPQNQRINYSYLPPGDYTLKIKTADIFGEWSDREA 779
Query: 725 LFDFEVLQPWYMTSIALVGY-VLSVLGLLALALWWRTRMILAANRKLKAQVELKTSQLRH 783
+ +L P++ T+ A Y +L + L + +++ R+ K + K ++ +
Sbjct: 780 MLHITILPPFWKTNWAYTAYTLLFAIMLYGILKFYKDRIHRRQAAAFKRLEDEKQREI-Y 838
Query: 784 QSKIVLSNN--HQLRKQLQLHHTILGNVLDNIDASLRHLSSYAKVRAW------------ 829
QSKI N H++R L L L ++L+ +A ++ K W
Sbjct: 839 QSKIEFFTNITHEIRTPLTLIKGPLESILNKENA----INPEIKESLWIMNKNTNRLIEL 894
Query: 830 SEFEAPFNKVKQELAQLHFMHRGDEDESKYHDLHLLIESALKSWQEEYSKALIKLTYSGE 889
S F K + + L+F +E D+ + + + + Q + T S
Sbjct: 895 SNELLDFRKTENKGFTLNFTR--NEIGKLLEDIFIRFKGSAEQQQVNF-----HFTGSDA 947
Query: 890 PRFVEVRQFNLDVLFNAVLTDAIKRLYKHQELTIQLEVRNAQAVIVFSDFGAPI------ 943
P F +V + + + +L++AIK +L + + A ++ S+ G I
Sbjct: 948 PFFADVDREAFTKVISNLLSNAIKNAESTAQLEMAISPAEAHFKVIVSNDGHLISPENRE 1007
Query: 944 ----------QNIDKTMVTLSGSSYPL-EELVIRSGGVLHV--------------LALKE 978
+K T +G PL L GG LHV L +K+
Sbjct: 1008 KIFEPFFQEGNEFNKPNTTGTGLGLPLARSLAEMHGGSLHVDPDYPQNRNTFVLDLPIKQ 1067
Query: 979 RNVIELAWPLATLP----ELETIHKPEEGEQAAKVGIDEVEKE 1017
+N I++ A P +T P+ + + E KE
Sbjct: 1068 KNTIKITEIPAEQPAPDRPTKTTKSPKPAASKGAILVVEDNKE 1110
Score = 61.2 bits (147), Expect = 5e-13
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 1015 EKEWLSKVEKLIELHYSDPNFTTSTAAQALYVSERSLQRRFKAATGKTFKESLNEVRLEK 1074
++E+LS+ + I + S+ F + A L +S+ SL R+ K + T + VRL+K
Sbjct: 1243 DEEFLSQANEAILENLSNERFGVNEMADILCMSQSSLLRKIKGVSKMTPNGYIRLVRLKK 1302
Query: 1075 ACQSLLSGA-KIAQVAFDCGFNDPSYFSQRFKHHFGLSPSQFIEDQE 1120
A + L SG + +++ GFN PSYFS+ F+ FG P F + E
Sbjct: 1303 AAEMLQSGQYTVTEISEKVGFNSPSYFSKCFQKQFGELPKDFTKSSE 1349
Score = 57.4 bits (137), Expect = 7e-12
Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 18/215 (8%)
Query: 246 DRIGSSHVLSIAETEKEY-WIGTEDGLFVYSFITGKIVQLESNNQDGYALLGKKIYAMVN 304
D + S VLSI + + + W GT++GL Y K+ E++ + G A IY +
Sbjct: 38 DGLSGSTVLSILQDRQGFMWFGTKNGLNRYDGHNFKVFNPETSKKSGLA--DSFIYGLHE 95
Query: 305 DFQGGMWIGTDKGIFYYSLFGQQFTRYPAQALSNDGSKT--PIGKIAALNSDGDYLAITA 362
D G +W+GT G++ Y+ + FT + +SN G++ +G+I Y A+
Sbjct: 96 DSNGIIWVGTAHGMYTYNSSTESFTHF--DKVSNLGNQIDGSVGEITEDLQGNIYFAVNN 153
Query: 363 QGLYNFNFSDE----------LRKHLIYPGKVNDFVIAQEHLWIATEK-GLVRYNLSRRS 411
+GL+ + +++ +L N V + LW++ + G+ ++ +
Sbjct: 154 RGLFQYQVAEDSLFQYQAISKTNVNLHDNNTTNVLVDEKGELWVSNSRLGVHKFLPKTKK 213
Query: 412 IDTPNLPLPLLQTAIQHLSLDSDGNLWGTSDYQIW 446
+++ A+ + + L GT D +W
Sbjct: 214 FKQYLTHSEVIKAAVLQMEDHGNNLLLGTKDLGVW 248