Pairwise Alignments

Query, 1121 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 976 a.a., Y_Y_Y domain. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 81.6 bits (200), Expect = 3e-19
 Identities = 139/676 (20%), Positives = 261/676 (38%), Gaps = 91/676 (13%)

Query: 246 DRIGSSHVLSIAETEKEYWI--GTEDGLFVYSFITGKIVQLESNNQDGYALLGKKIYAMV 303
           D + + H L+      E WI  GT+    +     GK+VQ  +  +    +    + ++ 
Sbjct: 242 DSLLTHHRLNCITRINEKWITMGTKSSGLLIMDQRGKLVQHYAYRE---GMQTNNVRSIF 298

Query: 304 NDFQGGMWIGTDKGIFYYSLFGQQFTRYPAQALSNDGSKTPIGKIAALNSDGDYLAITAQ 363
            D   G+W+G D GI Y ++ G     +P      D  K   G  AA + D  Y+  TA 
Sbjct: 299 VDKNKGLWLGLDDGIDYIAINGAIKQIHP------DKDKRVTGYAAAYHHDHLYVG-TAD 351

Query: 364 GLYNFNFSDELRKHLIYPGKVNDFVIAQEHLW----------IATEKG--LVRYNLSRRS 411
           GLY F+FS++        G+ +    +   +W          +A E G   +  N + + 
Sbjct: 352 GLYQFDFSEQTEDLSYSKGRFSPVKYSTGQVWNLQTINDQLLMAHEDGAFFIENNTAFQI 411

Query: 412 IDTPNLPLPLLQTAIQHLSLDSDGNLWGTSD--YQIWSYSLSEKNYRDYGSEWMVKAFSP 469
              P   L    + I    L S     GT    YQI   S +      +G    ++ FS 
Sbjct: 412 YPAPGTWLFQPASPI----LPSHDVFIGTYTGLYQIAYQSGA------FGHHRALEGFSE 461

Query: 470 SRITLLAAVKDGIVIGTEHGAYSLLEKQIRFDFSSHRYGEILQVAE----DSSGHIWLVG 525
           S   ++   ++  + G+ H    +    +  D S     ++    E    D   +I+ + 
Sbjct: 462 SLRFMVMDYQNNRIWGS-HPYRGIFRLDLSSDHSKITATKVYTAKEGLPSDLYNYIYRIK 520

Query: 526 SY-------GVFQWRKDQPEAVTVELIEENIQPLCIAESKQ----GMWLISTKGISYYRN 574
           +        G++++   +   +  +++   ++   +   K+     +W +S K +S    
Sbjct: 521 NKIVVATEDGIYEYDGQEDRFIPSQIVNRTLKGTSLQYLKEDGEGNIWYVSNKNVSVIDF 580

Query: 575 QELTKHFGAPYGLISNEFLSASCAVGEEQ----DNSSLIIGSQFGVVKTNTEELAVSNLP 630
            + T     P+ +     LS     G E     D  +++IG+  G    N E+    N+ 
Sbjct: 581 TQSTAE--QPFTITHLPELSGKVVGGHESIYPIDQQNILIGANKGFFHINFEKYR-KNIT 637

Query: 631 NIQVTFSQVSVNHTTKLLGYRMSEPLKIAYGD----------SISFQFGALPSSRSQSLE 680
              V   +VS+      + +   +PL  A  D          S  F+F +    +  ++E
Sbjct: 638 PPDVLIGEVSLFGKKDSVLFGGHKPLAAAQTDDAPSVPSSWNSFHFEFSSTLFGQFSTIE 697

Query: 681 YKLNDE---QQWQRFDW-ALLNFDQLLPGKYRLKVRSANPTQRYRTEALFDFEVLQPWYM 736
           Y    E   + W  +   +  ++  L  G+Y  KV+S N        + + F VL  WY 
Sbjct: 698 YSYMLEGFDRSWSHWSGKSEKDYTNLPAGQYSFKVKSRNNLGNESRVSTYTFTVLPAWYN 757

Query: 737 TSIALVGYVLSVLGLLALALWWRTRMILAANRKLKAQVELKTSQLRHQSKIVLSNNHQLR 796
           T  + + Y+L + G++ + L W+ +  L     LK   +L+    +++ +IV   N +LR
Sbjct: 758 TLWSYILYLLILSGIIYVVLKWQKKKHLKEQAHLKHFHQLELD--KNEKEIVKLKNDKLR 815

Query: 797 KQLQLHHTILGNVLDNIDASLRHLSSYAKVRAWSEFEAPFNKVKQELAQLHFMHRGDEDE 856
             +   +         + ++  HL    KV           K+K+EL  L   H+ + + 
Sbjct: 816 ADINFKN-------QELASTTMHLVQRGKV---------LTKIKEELMVLGKNHKLENES 859

Query: 857 SKYHDLHLLIESALKS 872
           + +  L  LI    +S
Sbjct: 860 TDFKRLLKLISEVERS 875