Pairwise Alignments

Query, 1121 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1219 a.a., Signal transduction histidine kinase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 85.1 bits (209), Expect = 3e-20
 Identities = 122/601 (20%), Positives = 242/601 (40%), Gaps = 71/601 (11%)

Query: 251 SHVLSIAETEKEYWIGTEDGLFVYSFITGKIVQLESNNQDGYALLGKKIYAMVNDFQGGM 310
           S+    A  ++  W  ++ GL   +  T   +   ++ ++  +L    +  +  D  G +
Sbjct: 143 SYHTKYASNQQYEWQTSDYGLVQINKTTHDTLIYHADARNPMSLSDHLVKDVYLDDNGHL 202

Query: 311 WIGTDKG-IFYYSLFGQQFTRYPAQALSNDGSKTPIGKIAALNSDGD-YLAITAQGLYNF 368
           W+GT  G + +  L+ + F  Y  +    +G    + +   ++  G  ++    QG+   
Sbjct: 203 WVGTQSGGVDHADLYDKAFKNY-YKGRRGEGLIDNVARAICMDQSGRLWIGSENQGITIL 261

Query: 369 NFSDELRKHLIYPGK-VND------FVIAQEHLWIATEKGLVRYNLSRRSIDTPNLPLPL 421
           +F      +    GK + D      F   +  +WI T+KGL  ++  ++   +    + +
Sbjct: 262 SFDHATPSYSYIGGKNLPDLRIRTLFCDTKGRVWIGTKKGLFYFDPKKQEFTS--CTMDM 319

Query: 422 LQTAIQHLSLDSDGNLWGTSDYQIWSYSLSEKNYRDYGSEWMVKAFSPSRIT-LLAAVKD 480
              ++  ++ D +G +W  + Y + SY      +    +       + ++I  LL   K 
Sbjct: 320 CHPSVFSITEDHNGTIWVGTFYGLASYDPQTDKFHCLST---TNGLAGNQIMDLLMDHKG 376

Query: 481 GIVIGTEHGAYSLLEKQIRF----DFSSHRYGE----------ILQVAEDSSGHIWLVGS 526
            +   TE G  S ++  + +    D +++R+            +  +AED  GHIW    
Sbjct: 377 QLWAATEDGGISCIKNPVPYSNEQDITNYRHNSAPGNRLLSNRVFSLAEDHLGHIWAASD 436

Query: 527 YGVFQWRKDQPEAVTVELIEENIQPLCIA---ESKQGMWLISTKGISYY-RNQELTKHFG 582
            G+     DQ            I  L +A   +    +W   TKG+S         +HF 
Sbjct: 437 AGLNCIYPDQQSIQHYSTSNGLIDDLTMAVAFDGSHSIWTSHTKGLSRLDLATNKIQHFN 496

Query: 583 APYGLISNEFLSASCAVGEEQDNSSLIIGSQFGVVKTNTEELAVS-NLPNIQVTFSQVSV 641
              GL  NEF  +  AV     +  L  G   G+      ++  + N PN+ +T  ++SV
Sbjct: 497 RKDGLQGNEFKQS--AVFRNPTDHRLYFGGSNGMTTFIPSQIKTNPNPPNMALT--RLSV 552

Query: 642 NHTTKLLGYRM------------SEPLKIAYGD-SISFQFGAL--PSSRSQSLEYKLND- 685
            H    +G ++            +E + + + + S   +F A+   +  S   +YKL   
Sbjct: 553 MHQELNIGTKVRDRVILKSSLLTTEAITLTWWEKSFQVEFAAIHFTNPLSNKYQYKLEGY 612

Query: 686 EQQWQRFDWA--LLNFDQLLPGKYRLKVRSANPTQRY-RTEALFDFEVLQPWYMTSIALV 742
           ++ W   D    + ++  L PG+Y  KV  AN    +  + A+    VL PW+++  A+ 
Sbjct: 613 DEAWITTDATRRIASYANLPPGEYTFKVLGANSDGVWSESPAMLKIIVLTPWWLSWWAVC 672

Query: 743 GYVLSVLGLLALALWWRTRMILAANRKLKAQVELKTSQLRHQSKIVLSN--NHQLRKQLQ 800
            Y +    ++A  +W          R L ++++L+  +  H SK+      +H+ R  L 
Sbjct: 673 FYFM----VVACVVW-------LVYRYLDSKIQLRKKEAIHHSKLQFFTEISHEFRTPLT 721

Query: 801 L 801
           L
Sbjct: 722 L 722



 Score = 65.5 bits (158), Expect = 2e-14
 Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 1/115 (0%)

Query: 1004 EQAAKVGIDEVEKEWLSKVEKLIELHYSDPNFTTSTAAQALYVSERSLQRRFKAATGKTF 1063
            E+      + V+K +L    + IE +    +    + A+ L +S     R+ K  T K+ 
Sbjct: 1099 EELPSCTANPVDKAFLENAREYIEHNLESEDLDVDSLAKKLNMSRPQFYRKIKGLTDKSA 1158

Query: 1064 KESLNEVRLEKACQSLLSGA-KIAQVAFDCGFNDPSYFSQRFKHHFGLSPSQFIE 1117
             E +   R+EKA + L SG   +++ A+  G+N P+ FS+ F  HFG+SPSQ+I+
Sbjct: 1159 AEFITSFRMEKASKLLRSGEFNVSETAYKVGYNLPNNFSRAFIKHFGVSPSQYIK 1213



 Score = 48.5 bits (114), Expect = 3e-09
 Identities = 71/335 (21%), Positives = 139/335 (41%), Gaps = 52/335 (15%)

Query: 299 IYAMVNDFQGGMWIGTDKGIFYYSLFGQQFTRYPAQALSNDGSKTPIGKIAALNSD---G 355
           +Y++  D  G MW GT  G   Y  +  Q  R    A   D +     +I+ + +D    
Sbjct: 46  VYSIAKDKYGFMWFGTWGGAVRYDGYNVQVFR----ANEKDSTALSDNRISGIVTDSLQN 101

Query: 356 DYLAITAQG-LYNFNFSDELRKHLIYPGKVNDFV---------------IAQEHLWIATE 399
            ++ +   G L+ F++  E   H    G+V D++                 Q++ W  ++
Sbjct: 102 IWIEVEPHGALFQFDYQTE-SFHRPREGQVPDYLREKLLKRYSYHTKYASNQQYEWQTSD 160

Query: 400 KGLVRYNLSRRS-----IDTPNLPLPLLQTAIQHLSLDSDGNLW-GTSDYQIWSYSLSEK 453
            GLV+ N +         D  N P+ L    ++ + LD +G+LW GT    +    L +K
Sbjct: 161 YGLVQINKTTHDTLIYHADARN-PMSLSDHLVKDVYLDDNGHLWVGTQSGGVDHADLYDK 219

Query: 454 NYRDYGSEWMVKAFSPSRITLLAAVKDG-IVIGTEHGAYSLLEKQIRFDFSSHRYGEI-- 510
            +++Y      +    +    +   + G + IG+E+   ++L     FD ++  Y  I  
Sbjct: 220 AFKNYYKGRRGEGLIDNVARAICMDQSGRLWIGSENQGITILS----FDHATPSYSYIGG 275

Query: 511 -----LQVAE---DSSGHIWLVGSYGVFQW--RKDQPEAVTVELIEENIQPLCIAESKQG 560
                L++     D+ G +W+    G+F +  +K +  + T+++   ++    I E   G
Sbjct: 276 KNLPDLRIRTLFCDTKGRVWIGTKKGLFYFDPKKQEFTSCTMDMCHPSV--FSITEDHNG 333

Query: 561 -MWLISTKGISYYRNQELTKH-FGAPYGLISNEFL 593
            +W+ +  G++ Y  Q    H      GL  N+ +
Sbjct: 334 TIWVGTFYGLASYDPQTDKFHCLSTTNGLAGNQIM 368



 Score = 44.7 bits (104), Expect = 5e-08
 Identities = 50/236 (21%), Positives = 95/236 (40%), Gaps = 31/236 (13%)

Query: 225 LLVGSK-RGALVIDIENKRPPLDRIGSSHVLSI------AETEKEYWIGTEDGLFVYSFI 277
           L +GS+ +G  ++  ++  P    IG  ++  +       +T+   WIGT+ GLF   + 
Sbjct: 249 LWIGSENQGITILSFDHATPSYSYIGGKNLPDLRIRTLFCDTKGRVWIGTKKGLF---YF 305

Query: 278 TGKIVQLESNNQDGYALLGKKIYAMVNDFQGGMWIGTDKGIFYYSLFGQQFTRYPAQALS 337
             K  +  S   D   +    ++++  D  G +W+GT  G+  Y     Q  ++   + +
Sbjct: 306 DPKKQEFTSCTMD---MCHPSVFSITEDHNGTIWVGTFYGLASYD---PQTDKFHCLSTT 359

Query: 338 NDGSKTPI--------GKIAALNSDGDYLAITAQGLYNFNFSDELRKHLIYPG----KVN 385
           N  +   I        G++ A   DG    I     Y+        +H   PG       
Sbjct: 360 NGLAGNQIMDLLMDHKGQLWAATEDGGISCIKNPVPYSNEQDITNYRHNSAPGNRLLSNR 419

Query: 386 DFVIAQEHL---WIATEKGLVRYNLSRRSIDTPNLPLPLLQTAIQHLSLDSDGNLW 438
            F +A++HL   W A++ GL      ++SI   +    L+      ++ D   ++W
Sbjct: 420 VFSLAEDHLGHIWAASDAGLNCIYPDQQSIQHYSTSNGLIDDLTMAVAFDGSHSIW 475