Pairwise Alignments
Query, 1121 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056
Subject, 1053 a.a., Signal transduction histidine kinase from Echinicola vietnamensis KMM 6221, DSM 17526
Score = 85.1 bits (209), Expect = 3e-20
Identities = 135/735 (18%), Positives = 317/735 (43%), Gaps = 80/735 (10%)
Query: 264 WIGTEDGLFVYSFITGKIVQLESNNQDGYALLGKKIYAMVNDFQGGMWIGT-DKGIFYYS 322
++GT DGL V ++ S+ + + L G IY + G +W+ ++GIF Y
Sbjct: 287 FVGTLDGLNVLHLRKDTFSRIHSDQANPHKLQGDNIYKVSAGRDGSLWVAVYNEGIFQYH 346
Query: 323 LFGQQFTRYPAQALSNDGSKTPIGKIAAL--NSDGDYLAITAQGLYNFNF-SDELRKHLI 379
+ ++ + L D + +++++ + + +YL T GL+ N + + K+ I
Sbjct: 347 ---PHYHKFNSVDLVTDATDKYYSRVSSMIQHDEDEYLFTTYSGLFVQNIKTGKTAKYTI 403
Query: 380 YPG---KVNDFV----IAQEHLWIATEKGLV-RYNLSRRSID-----------TPNLPLP 420
G VN I + WI+T V +N +S+ P LP
Sbjct: 404 STGDQSSVNRLAMITRITPDIYWISTWAHFVYEWNHQTKSLRPLSHQTPEGHFLPEFNLP 463
Query: 421 LLQTAIQHLSLDSDGN---LWGTSDYQIWSYSLSEKNYR-DYGSEWMVKAFSPSRITLLA 476
+L + + + + +W + + + + + D E++ F S+ L
Sbjct: 464 ILHDSQERTWIGNSEKGLFIWNPTTQTADPFPIGDTLIQGDNHDEFISYIFEDSQQRLWV 523
Query: 477 AVKDGIVI--GTEHGAYSLLEKQIRFDFSSHRYGEILQVAEDSSGHIWLVGSYGVFQWRK 534
+ G+ + T+H K D +S ++ ++ED +G++W+ G+ ++
Sbjct: 524 GSQGGLNLLNETDHSFTKFAHKD--GDANSLSNNKVNHISEDHAGNLWVSTELGLSKFNP 581
Query: 535 DQPEAV---TVELIEENIQPLCIAESKQGMWLISTKGISYYRNQELTKHFGAPYGLISNE 591
T + + N+ + +++ +W+ + +G+S + +++ GL+ N
Sbjct: 582 TDSSFTNFYTHDGLPSNVISSTLEDARHNIWVATAEGLSVLDREGNFRNYNQQDGLMDNY 641
Query: 592 FLSASCAVGEEQDNSSLIIGSQFGV-------VKTNTEELAVSNLPNIQVTFSQVSVNHT 644
F+ + A + Q N L GS G+ + NT+ +V + I + ++++ +
Sbjct: 642 FIFRA-AYKDSQGN--LFFGSSSGLEYFDPLKIPENTKPPSV-QITGIDLFNTRITPGDS 697
Query: 645 TKLLGYRM--SEPLKIAYGDS-ISFQFGALP--SSRSQSLEYKLND-EQQWQRF-DWALL 697
+ +L + ++ + + + S ISF F AL + +Y+L ++ W+
Sbjct: 698 SGILDRAIPYTDEISLTHEQSVISFHFTALNLINGHKNKFQYQLKGYDKSWRPLTTQRST 757
Query: 698 NFDQLLPGKYRLKVRSANPTQRYRTE-ALFDFEVLQPWYMTSIALVGYVLSVLGLLALAL 756
+ L PG Y +V++ N + T+ A +L PWY+T + +++LG +
Sbjct: 758 TYTNLPPGHYTFQVKACNNDGFWSTQHASIGLTILPPWYLTWWFKTLFTIALLG----TI 813
Query: 757 WWRTRMILAANRKLKAQVELKTSQLRHQSKIVLSNNHQLRKQLQLHHTILGNVLDNIDAS 816
++ + I +L+ V +T++++ Q + + + + L+++ Q ++L + + +
Sbjct: 814 LYQYQRIEKNKERLENLVVQRTAEIQQQKEQIETQHDSLQEKNQRIESLLRELNHRVKNN 873
Query: 817 LRHLSSYAKVRAWS----EFEAPFNKVKQELAQLHFMHR----GDED-----ESKYHDLH 863
L+ +SS +++ S + + + L +H+ D D ++ DL
Sbjct: 874 LQLVSSILNLQSRSVKDKNAKVALIDGRMRMQALSLLHQKLYVSDNDSQVNCKTYISDLF 933
Query: 864 LLIESALKSWQEEYSKALIKLTYSGEPRFVEV-RQFNLDVLFNAVLTDAIKRLYKHQELT 922
IE+A KS + ++ + G+ + + + L ++ N ++T++ K + + +++
Sbjct: 934 DQIEAAFKSRYK-----TLQYNFEGDDFSLGLDKAIPLGLILNELITNSFKHV-QDEKIE 987
Query: 923 IQLEVRNAQAVIVFS 937
I L ++ + ++ F+
Sbjct: 988 IHLSLKLEEQLVHFT 1002
Score = 40.4 bits (93), Expect = 7e-07
Identities = 27/152 (17%), Positives = 66/152 (43%), Gaps = 11/152 (7%)
Query: 258 ETEKEYWIGTEDGLFVYSFITGKIVQLESNNQDGYALLGKKIYAMVNDFQGGMWIGTDKG 317
++++ W+G++ GL + + + + D +L K+ + D G +W+ T+ G
Sbjct: 516 DSQQRLWVGSQGGLNLLNETDHSFTKFAHKDGDANSLSNNKVNHISEDHAGNLWVSTELG 575
Query: 318 IFYYSLFGQQFTRYPAQALSNDGSKTPIGKIAALNSDGDYLAITAQGLYNFNFSDELRKH 377
+ ++ FT + ++DG + + ++ + TA+GL + R +
Sbjct: 576 LSKFNPTDSSFTNF----YTHDGLPSNVISSTLEDARHNIWVATAEGLSVLDREGNFRNY 631
Query: 378 LIYPGKVNDFVI-------AQEHLWIATEKGL 402
G ++++ I +Q +L+ + GL
Sbjct: 632 NQQDGLMDNYFIFRAAYKDSQGNLFFGSSSGL 663
Score = 34.3 bits (77), Expect = 5e-05
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 16/162 (9%)
Query: 258 ETEKEYWIGTEDG-LFVYSFITGKIVQLESNNQDGYALLGKKIYAMVNDFQGGMWIGTDK 316
+++ W GT G + Y T + + +L ++ + D +G +W+GT
Sbjct: 94 DSKNNIWAGTYGGGVSKYDPRTDRFTNYSYQKNNLNSLSDDQVRGIAEDPKGNIWLGTSN 153
Query: 317 GIFYYSLFGQQFTRYPAQALSNDGSKTPIGKIAALNSDGDYLAI-TAQGLYNFNFSD--- 372
G+ + FTRY + DG + + L++D L I T GL N +
Sbjct: 154 GLCQLNPDTGDFTRY----TTADGLLSKTIRQIKLSADHSRLFIATGNGLNILNLATMEF 209
Query: 373 ELRKHL-IYPGKVNDFVI------AQEHLWIATEKGLVRYNL 407
KHL P ++ F I + LW+ T GL + NL
Sbjct: 210 SGIKHLPDQPQSLSHFYIYDILEYPKGILWVGTGGGLDKLNL 251
Score = 29.6 bits (65), Expect = 0.001
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 28/159 (17%)
Query: 388 VIAQEHLWIATEKGLVRYNLSRRSIDTPNLPLPLLQTAIQHLSLDSDGNLW--GTSDYQI 445
V AQE L + E G + + I+ P P +L + ++ + + LW D+Q
Sbjct: 20 VRAQELLPVFREYG------AAQGINQP-FPYDILHSQSGYVWVAGENGLWKFDGQDFQH 72
Query: 446 WSYSLSEKNYRDYGSEWMVKAFSPSRITLLAAVKDGIVIGTEHGAYSLLEKQI-RFDFSS 504
+++ + + + W++ F S K+ I GT G S + + RF S
Sbjct: 73 YAHEVKDSTSLAFDFVWVL--FEDS--------KNNIWAGTYGGGVSKYDPRTDRFTNYS 122
Query: 505 HRYG--------EILQVAEDSSGHIWLVGSYGVFQWRKD 535
++ ++ +AED G+IWL S G+ Q D
Sbjct: 123 YQKNNLNSLSDDQVRGIAEDPKGNIWLGTSNGLCQLNPD 161
Score = 27.7 bits (60), Expect = 0.005
Identities = 34/165 (20%), Positives = 66/165 (40%), Gaps = 12/165 (7%)
Query: 254 LSIAETEKEYWIGTEDGLFVYSFITGKIVQLESNNQDGYALLGKKIYAMVNDFQGGMWIG 313
+ ++ +I T +GL + + T + ++ +L IY ++ +G +W+G
Sbjct: 182 IKLSADHSRLFIATGNGLNILNLATMEFSGIKHLPDQPQSLSHFYIYDILEYPKGILWVG 241
Query: 314 TDKGIFYYSLFGQQFTRYPAQALSNDGSKTPIGKIAALNSDGDYLAI-TAQGL------- 365
T G+ +L T Y + A S I IA D L + T GL
Sbjct: 242 TGGGLDKLNLKTGHITHYQSDADPTTLSHDVIFSIAHHPDHPDKLFVGTLDGLNVLHLRK 301
Query: 366 --YNFNFSDELRKHLIYPGKVNDFVIAQE-HLWIAT-EKGLVRYN 406
++ SD+ H + + ++ LW+A +G+ +Y+
Sbjct: 302 DTFSRIHSDQANPHKLQGDNIYKVSAGRDGSLWVAVYNEGIFQYH 346