Pairwise Alignments
Query, 1121 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056
Subject, 1346 a.a., response regulator from Bacteroides stercoris CC31F
Score = 90.9 bits (224), Expect = 6e-22
Identities = 176/849 (20%), Positives = 332/849 (39%), Gaps = 105/849 (12%)
Query: 148 YSYEIRSGRVESL-SLHELYQLNSASKVVINDAQFLVSKWALATNVGVYLSDEQGFAHVK 206
Y Y +++G +E+L LH+ Q+NS N W G+YL D VK
Sbjct: 193 YMYSLQNGALETLLDLHDKVQINSILCQTPNRI------WVATEGNGLYLYD------VK 240
Query: 207 NSGKHFIQKLYFSHKRRELLVGSKRGALVIDIENKRPPLDRIGSSHVLSIA-ETEKEYWI 265
N K Y ENK L + S++V S+A + E W+
Sbjct: 241 N--KKLDNYRY---------------------ENK---LSCLNSNYVRSLALDQENRLWV 274
Query: 266 GTEDGLFVYSFITGKIVQLESNNQDGYALLGKKIYAMVNDFQGGMWIGTD-KGIFYYSLF 324
GT GL +Y + + +ES+ L + + D QGGMW+GT G+ YY
Sbjct: 275 GTYSGLNIYQEGKERFISVESSMAQAGTLSQNSVRCIFRDSQGGMWLGTYWGGLNYYHPL 334
Query: 325 GQQFTRYPAQALSNDGSKTPIGKIAALNSDGDYLAITAQGLYNFNFSDELRKHLIYPGKV 384
+F + SN S + I + ++ + GL ++ + + K+ ++ +
Sbjct: 335 CNRFQQIKHIPFSNSLSDNVVSCIVEDKKNNLWIGTSDGGLNFYDNTAKTYKNYLFNPDI 394
Query: 385 NDFV-----------IAQEHLWIATEKG----LVRYNLSRRSIDTPNLPLPLLQTAIQHL 429
++ V A + +++ G L R + + N LP I +
Sbjct: 395 SEGVPFKDVKTVYVDEASDKIYVGAHAGGMMVLHRKTGRKEFYNQQNGGLP--SNHIYSI 452
Query: 430 SLDSDGNLWGTSDYQIWSYSLSEKNYRDYGSEWMVKAFSPSRITLLAAVKDGIVIGTEHG 489
D LW S ++ + ++ K + + + L + I IG E G
Sbjct: 453 ISDGKDGLWIASLDYLFHFDIAGKRFTVINEDVEGHSIQKKNRLLFRDSRKRIWIGGEKG 512
Query: 490 --AYSL--LEKQIRFDFSSHRYGEILQ------VAEDSSGHIWLVGSYGVFQWR---KDQ 536
Y+ + Q DF R +LQ + E SG IW+ G+F + K+
Sbjct: 513 LSVYNQVGMAWQANTDF---RITPVLQQSFVNCIYESLSGSIWVGTRDGLFALKEADKEL 569
Query: 537 PEAVTVELIEENIQPLCIAESKQGMWLISTKGISYY--RNQELTKHFGAPYGLISNEFLS 594
+ T + + N+ + +S +W+ + +G+S + N+++ ++F GL SN+F +
Sbjct: 570 QQYTTDDGLPSNVIYGILEDSYGRLWVSTNQGLSCFDPENRKM-RNFTIVDGLQSNQFNA 628
Query: 595 AS-CAVGEEQDNSSLIIGSQFGVVKTNTEEL---AVSNLPNIQVTF---SQVSVNHTTKL 647
S C +G N +++ G G+ E L + P I F +V N T +
Sbjct: 629 GSYCRIG----NGNMLFGGINGITMFRPETLIDNPYTPKPVINKLFVFNKEVLPNDETGI 684
Query: 648 LGYRMSEPLKIAYGD-----SISFQFGALPSSRSQSLEYKLN--DEQQWQRFDWALLNFD 700
L + I S+SF + + + YKL ++ +++ D + +++
Sbjct: 685 LKENIESVNHITLKSSQNSFSLSFVVSNYIAGKHNTFAYKLKGYHDEWYKQGDISPVSYS 744
Query: 701 QLLPGKYRLKVRSANPTQRYRTEA-LFDFEVLQPWYMTSIALVGYVLSVLGLL--ALALW 757
L G Y +++AN ++ E VL WY T A + + L + L+ +
Sbjct: 745 NLPAGDYTFLLKAANNDGKWSGEVEALHIHVLPVWYRTWWAFLIFALFFILLVFAVFRFF 804
Query: 758 WRTRMILAANRKLKAQVELKTSQLRHQSKIVLSNNHQLRKQLQLHHTILGNVLDNIDASL 817
W + + R + E K + + + ++ +H+LR L L + L +L ++
Sbjct: 805 WLRKSMQTEIRMERLDREKKEEISQMKIRFYVNISHELRTPLTLIISPLQELLSSVTGHW 864
Query: 818 -RHLSSYAKVRAWSEFEAPFNKVKQELAQLHFMHRGDEDESKYHDLHLLIESALKSWQEE 876
R Y + A + A+L E Y + + + ++ +++
Sbjct: 865 EREKLLYIQRNARRLLHLVNQLMDYRRAELGIF----ELRPSYANAYKRVLNSFLNYESL 920
Query: 877 YSKALIKLTYSGEPRFVEV--RQFNLDVLFNAVLTDAIKRLYKHQELTIQLEVRNAQAVI 934
K I + E + +V LD++ N +L++A K + + + ++L + V+
Sbjct: 921 AKKKDIDYNFYSELQDEDVLFDGTYLDLIINNLLSNAFKYTEEGERIYVKLYREDKNVVL 980
Query: 935 VFSDFGAPI 943
+D G I
Sbjct: 981 QVADTGVGI 989
Score = 72.8 bits (177), Expect = 2e-16
Identities = 35/109 (32%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Query: 1008 KVGIDEVEKEWLSKVEKLIELHYSDPNFTTSTAAQALYVSERSLQRRFKAATGKTFKESL 1067
K+ + +++E L K ++E + S+ F+T A + +S +L + KA TGK+ + +
Sbjct: 1235 KIANNAMDEELLRKAIAVVEKNMSNVEFSTEQFASEMNMSRSNLHLKLKAITGKSAIDFI 1294
Query: 1068 NEVRLEKACQSLLSGA-KIAQVAFDCGFNDPSYFSQRFKHHFGLSPSQF 1115
+++R +ACQ L G +++++F G+N PSYFS RFK + G P+++
Sbjct: 1295 HKIRFNRACQLLKEGKYTVSEISFMVGYNTPSYFSARFKKYIGCLPTEY 1343
Score = 49.3 bits (116), Expect = 2e-09
Identities = 74/401 (18%), Positives = 162/401 (40%), Gaps = 41/401 (10%)
Query: 206 KNSGKHFIQKLYFSHKRRELLVGSKRGALVIDIENKRPPLDRIGSS----HVLSIAETEK 261
K G++ + ++ L++G+ G L+ D++ +R D + ++ L++ +
Sbjct: 123 KKKGQNVTVRNIVPMQKDWLMLGTTEGILLFDVKGERFLNDTLSATLHSLKPLTLLRQDD 182
Query: 262 EYWIGTEDGLFVYSFITGKIVQLESNNQDGYALLGKKIYAMVNDFQGGMWIGTD-KGIFY 320
+ +IGT+ +++YS G + L + +I +++ +W+ T+ G++
Sbjct: 183 DIFIGTKGKVYMYSLQNGALETLLDLHDK------VQINSILCQTPNRIWVATEGNGLYL 236
Query: 321 YSLFGQQFTRYPAQALSNDGSKTPIGKIAALNSDGDYLAITAQGLYNFNFSDE----LRK 376
Y + ++ Y + + + + + AL+ + T GL + E +
Sbjct: 237 YDVKNKKLDNYRYENKLSCLNSNYVRSL-ALDQENRLWVGTYSGLNIYQEGKERFISVES 295
Query: 377 HLIYPGKVND------FVIAQEHLWIATEKGLVRY--NLSRRSIDTPNLPL--PLLQTAI 426
+ G ++ F +Q +W+ T G + Y L R ++P L +
Sbjct: 296 SMAQAGTLSQNSVRCIFRDSQGGMWLGTYWGGLNYYHPLCNRFQQIKHIPFSNSLSDNVV 355
Query: 427 QHLSLDSDGNLW-GTSDYQIWSYSLSEKNYRDYGSEWMVK---AFSPSRITLLAAVKDGI 482
+ D NLW GTSD + Y + K Y++Y + F + + D I
Sbjct: 356 SCIVEDKKNNLWIGTSDGGLNFYDNTAKTYKNYLFNPDISEGVPFKDVKTVYVDEASDKI 415
Query: 483 VIGTEHGAYSLLEKQI-RFDFSSHRYG-----EILQVAEDSSGHIWLVGSYGVFQW--RK 534
+G G +L ++ R +F + + G I + D +W+ +F +
Sbjct: 416 YVGAHAGGMMVLHRKTGRKEFYNQQNGGLPSNHIYSIISDGKDGLWIASLDYLFHFDIAG 475
Query: 535 DQPEAVTVELIEENIQP---LCIAESKQGMWLISTKGISYY 572
+ + ++ +IQ L +S++ +W+ KG+S Y
Sbjct: 476 KRFTVINEDVEGHSIQKKNRLLFRDSRKRIWIGGEKGLSVY 516
Score = 47.0 bits (110), Expect = 1e-08
Identities = 62/292 (21%), Positives = 123/292 (42%), Gaps = 29/292 (9%)
Query: 256 IAETEKEYWIGTEDGLFVYSFITGKIVQLESNNQDGYALLGKKIYAMVNDFQGGMWIGTD 315
+ + + WIGT +GL +Y+ + + G + + I M D+ + +GT
Sbjct: 92 VIDNDNRIWIGTREGLSLYNHRKNEFSNF-FYKKKGQNVTVRNIVPMQKDW---LMLGTT 147
Query: 316 KGIFYYSLFGQQFTRYPAQALSNDGSKTPIGKIAALNSDGDYLAITAQGLYNFNFSD-EL 374
+GI + + G++F A + + + L D D T +Y ++ + L
Sbjct: 148 EGILLFDVKGERFLNDTLSATLHS-----LKPLTLLRQDDDIFIGTKGKVYMYSLQNGAL 202
Query: 375 RKHLIYPGKVN-DFVIAQ--EHLWIATE-KGLVRYNLSRRSIDT---PNLPLPLLQTAIQ 427
L KV + ++ Q +W+ATE GL Y++ + +D N L ++
Sbjct: 203 ETLLDLHDKVQINSILCQTPNRIWVATEGNGLYLYDVKNKKLDNYRYENKLSCLNSNYVR 262
Query: 428 HLSLDSDGNLWGTSDYQIWSYSLSEKNYRDYGSEWMVKAFSPSRITLLAAVKD---GIVI 484
L+LD + LW + + Y ++ + S M +A + S+ ++ +D G+ +
Sbjct: 263 SLALDQENRLWVGTYSGLNIYQEGKERFISVESS-MAQAGTLSQNSVRCIFRDSQGGMWL 321
Query: 485 GTEHGAYSLLE------KQIR-FDFSSHRYGEILQ-VAEDSSGHIWLVGSYG 528
GT G + +QI+ FS+ ++ + ED ++W+ S G
Sbjct: 322 GTYWGGLNYYHPLCNRFQQIKHIPFSNSLSDNVVSCIVEDKKNNLWIGTSDG 373