Pairwise Alignments

Query, 1121 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1350 a.a., response regulator from Bacteroides stercoris CC31F

 Score = 62.4 bits (150), Expect = 2e-13
 Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 3/111 (2%)

Query: 1013 EVEKEWLSKVEKLIELHYSDPNFTTSTAAQALYVSERSLQRRFKAATGKTFKESLNEVRL 1072
            +++ ++++ ++K +E +  +P+FT       L +S  S   + KA T +   + +  +RL
Sbjct: 1235 DLDWKFIASIKKNVEDNMDNPSFTIDVLCTLLNMSRTSFYNKLKALTDQAPGDYVRLIRL 1294

Query: 1073 EKACQSLLSGAK--IAQVAFDCGFNDPSYFSQRFKHHFGLSPSQFIEDQEN 1121
            ++A Q LL   K  I +VA   GF+D  YF + FK HF +SPSQ+ +++ N
Sbjct: 1295 KRAMQ-LLKEQKYTITEVAEMTGFSDAKYFREVFKKHFNISPSQYAKEEGN 1344



 Score = 51.2 bits (121), Expect = 5e-10
 Identities = 162/853 (18%), Positives = 339/853 (39%), Gaps = 128/853 (15%)

Query: 136 NGMIWMVDGENFYSYEIRSGRVESLSLHELYQLNSASKVVINDAQFLVSKWALATNVGVY 195
           N +IW+ +  N Y Y        SL+   +   N  ++ + +  Q   + + + T+VGV+
Sbjct: 137 NNIIWLCNQRNIYLYN-------SLTKATVVIKNEINESITDIEQIDETHYFIGTDVGVH 189

Query: 196 LSDEQGFAHVKNSGKHF------IQKLYFSHKRRELLVGS-KRGALVIDIE-----NKRP 243
            ++ +      +  +        I +L+F    R++ +G+ +RG  V D+      + + 
Sbjct: 190 YAELRNNVLALSPCEKLDTLRLQINELFFHKGSRKIFIGTFQRGIYVYDLNLHKAFHIKS 249

Query: 244 PLDRIGSSHVLSIAETEKEYWIGTEDGLFVY-----SFITGKIVQLESNNQDGYALLGKK 298
            L  +  + + +  E  K+  I T DG  VY     ++ +   +  + N  +  A+ G  
Sbjct: 250 GLIDVSINRICTFGE--KDILIAT-DGAGVYKMDVDTYRSEPYIVADFNRYN--AMNGNT 304

Query: 299 IYAMVNDFQGGMWIG------TDKGIFYYSLFGQQFTRYPAQALSNDGSKTPIGKIAALN 352
           IY +  D +  +W+       T +   Y      + +    Q+L ND     +      +
Sbjct: 305 IYDIYVDNEQRIWMANYPIGITVRNNRYSDYKWIKHSIGNKQSLINDQVNAVME-----D 359

Query: 353 SDGDYLAITAQGLYNFNFSDELRKHLI------YPGKVNDFV----IAQEHLWIAT-EKG 401
            +GD    T  G+  +    +     +         + + F+    ++   +W+     G
Sbjct: 360 EEGDLWYATNNGISLYEHRTQQWHSFLSVYDKEQKNQSHTFMSLCEVSPGIIWVGGYSSG 419

Query: 402 LVRYNLSRRSID--TPNL---PLPLLQTAIQHLSLDSDGNLWGTSDYQIWSYSLSEKNYR 456
           + + +  +RS+   TP L           I+ ++ D DG +W    Y +    L  KN  
Sbjct: 420 IYQIDKKKRSVSFFTPALFGGATIRPDKYIRSITKDRDGYIWSGGYYNLKRIDLKHKNIE 479

Query: 457 DYGSEWMVKAFSPSRITLLAAVKDG----IVIGTEHGAYSLLEKQIRFDF------SSHR 506
                      S   + ++  +K+     + IGT +G Y L +   ++ +      SS+ 
Sbjct: 480 -----------SIPGLEVITDIKERDEKYMWIGTANGLYLLEKATGKYWYITLPVESSYI 528

Query: 507 YG------EILQVAEDSSGHIWLVGSYGVFQ-WRKDQPEAVTVELIEENIQPLCIAESKQ 559
           Y        +L +  ++SG +    +   F+ + KD        LI  NI  + +++ K 
Sbjct: 529 YSLYQAPNGLLYIGTNNSGLLIYDPARQNFEHYHKDN-----CALISNNIYTI-LSDGKD 582

Query: 560 GMWLISTKGIS-YYRNQELTKHFGAPYGLISNEFLSASCAVGEEQDNSSLIIGSQFGVVK 618
            + L +  G+S +Y  ++   ++    GL S+ F + S   G  + N + I GS  G ++
Sbjct: 583 DILLSTEYGLSGFYLKEKRFHNWTKEQGLHSDHFNANS---GTLRKNGNAIFGSTDGAIE 639

Query: 619 TNTEELAVSNLPNIQVTFSQVSVNHTTK---------LLGYRMSEPLKIAYGDSI-SFQF 668
               ++ +    + ++ FS + V + T          +L    ++ LK+ Y  +I S Q 
Sbjct: 640 F-PRDMVLPREYSSRMIFSDLRVFYQTVYPKDEGSPLVLDIDETKSLKLKYSQNIFSLQV 698

Query: 669 GALPSSRSQSLEYKLNDE---QQWQR-FDWALLNFDQLLPGKYRLKVRSANPTQRYRT-- 722
            ++       + Y    E     W R  +  ++ F  L PG Y L+VR+ +   R     
Sbjct: 699 SSINYDYPSLILYSWKLEGFYDGWSRPGEENVIRFTNLNPGHYTLRVRAISSEDRRMVLE 758

Query: 723 EALFDFEVLQPWYMTSIALVGYVLSVLGLLALALWWRTRMILAANRKLKAQVELKTSQLR 782
           E   D  V QP +++  AL+ Y L ++ + ++AL     ++L   RK+            
Sbjct: 759 ERSIDIIVEQPIWLSIWALLLYALILVAIASIAL---RIIVLRKQRKISDDKIRFFVNTA 815

Query: 783 HQSKIVLSNNHQLRKQLQLHHTILGNVLDNIDASLRHLSSYAKVRAWSEFEAPFNKVKQE 842
           H  +  L+      ++L     +     DN+  +LR++++  ++          N +  E
Sbjct: 816 HDIRTPLTLIKAPLEELSDREKLSKEGTDNLSTALRNVNALLRLTT--------NLINFE 867

Query: 843 LAQLHFMHRGDEDESKYHDLHLLIESALKSWQEEYSKALIKLTYSGEPRFVEV--RQFNL 900
            A  +     +      ++L   +   +  ++   S   I LTY    R++ V   +  +
Sbjct: 868 RADTY----SNNFYVSEYELGAYMTDIVNVFRSYASVKHIDLTYESNFRYLNVWLDKDKM 923

Query: 901 DVLFNAVLTDAIK 913
           D +   ++++A+K
Sbjct: 924 DSILKNIISNALK 936