Pairwise Alignments

Query, 1121 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., Carnitine catabolism transcriptional activator from Alteromonas macleodii MIT1002

 Score = 65.1 bits (157), Expect = 8e-15
 Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1021 KVEKLIELHYSDPNFTTSTAAQALYVSERSLQRRFKAATGKTFKESLNEVRLEKACQSL- 1079
            K +  +  HYS P  + S  A   +VS+R+LQRRF  A G +  + L ++RL  ACQ + 
Sbjct: 217  KAQNYLANHYSQP-ISLSDLASHTFVSQRTLQRRFTQALGMSVIDYLQKLRLHHACQQIE 275

Query: 1080 LSGAKIAQVAFDCGFNDPSYFSQRFKHHFGLSPSQF 1115
            +S   IA +AF+ G+ + + F + F+  +GLSP ++
Sbjct: 276  VSTRSIADIAFNVGYQNVNAFRKIFRKEYGLSPVEY 311