Pairwise Alignments

Query, 1121 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 994 a.a., putative diguanylate cyclase YdaM from Alteromonas macleodii MIT1002

 Score = 96.7 bits (239), Expect = 8e-24
 Identities = 154/703 (21%), Positives = 295/703 (41%), Gaps = 90/703 (12%)

Query: 136 NGMIWMVDGENFYSYEIRSGRVESLSLHELYQLNSASKVVINDAQFLVSKWALATNVGVY 195
           NG +W+V   N Y+Y   S  VE +S    Y  ++ S   + D + + +   + +  G+Y
Sbjct: 155 NGQLWIVSERNLYTYSPESDSVELVS----YLPSTTS--TLTDIELIGNTLYVTSTSGLY 208

Query: 196 LSD--EQGFAHVKNSGKHFIQKLYFSHKRRELLVGSKRGALVIDIENKRPPLDR--IGSS 251
             D  ++    V     +F  +L  + K R  L  + RGA + + +++   +D+     +
Sbjct: 209 KLDPFKRSLELVAFENTNFT-RLVAAEKSRFWLGTATRGACLFNPDDQSTTIDKGCTSET 267

Query: 252 HVLS-------IAETEKEYWIGTEDGLFVY-SFITGKIVQLESNNQDGYALLGKKIYAMV 303
           H LS       + +   + W+ T+ GL +  S     +++   N +D      ++I ++ 
Sbjct: 268 HGLSDNYVTDILLKDNGDIWVSTQRGLNILTSHNPNSVLRAPINEKDAAK---ERISSLY 324

Query: 304 NDFQGGMWIGTDKGIFYYS--LFGQQFTRYPAQA-LSNDGSKTPIGKIAALNSDG----D 356
               G + +GT    F  S  L    +++   +  + +  S     ++   N  G    D
Sbjct: 325 QTKAGLVVVGTTDDGFAISNPLLSNFYSQEIGEGRIISSLSNYKDNQVWVANEKGLWLYD 384

Query: 357 YLAITAQGLYNFNFSDELRKHLIYPGKVNDFVIA------QEHLWIATEKGLVRYNLSRR 410
            ++ T +G +  N +      L      ND +++       + LW+ T  GL + N   R
Sbjct: 385 TISKTQEGPFTSNGA------LASSEDTNDKLLSVFYHTKSDVLWVTTRTGLAKLNPQTR 438

Query: 411 SIDTPNLPLPLLQTAIQHLSLDSDGNLW--GTSDYQIWSYSLSEKNYRDYGSEWMVKAFS 468
           +++     + L   +   +++D DG++W  G SD  ++ Y  SE        +W +    
Sbjct: 439 NLEF----VALNGKSGYSINIDDDGDIWYGGYSD-GLFVYRPSEDRVI---KQWPLSL-- 488

Query: 469 PSRITL-------LAAVKDGIVIGTEHGAYSLLEKQIRFDFSSHRYGEILQVAEDSSGHI 521
            +RI L       L+ V    V     G  + + +   F         +  +++   G  
Sbjct: 489 TTRIVLDDNENAWLSTVSGLFVANKLTGDLTSISE---FTDKISDQTVVTWISQSKRGGY 545

Query: 522 WL-VGSYGVFQWRKDQPEAVTVELIE-------ENIQPLCIAESKQ-GMWLISTKGISYY 572
           W+   + G+F   K+  +  T+++ +        N+    I E  + G+W+ + KGI+Y 
Sbjct: 546 WIGTQAAGLFFMSKEGSDLSTIKVTQIKPESRLSNVSIGAIVEDDEYGLWISTIKGIAYL 605

Query: 573 RNQELT-KHFGAPYGLISNEFLSASCAVGEEQDNSSLIIGSQFGVVKTNTEELA------ 625
                T  +FGA  G +S+ +   S  V E   N++++ G   GV +     +A      
Sbjct: 606 APDLSTLSYFGAENGALSSGYYIGSVTVTE---NNTILFGGTEGVTQFTPSHVANVQWSP 662

Query: 626 VSNLPNIQVTFSQVSVNHTTKLLGYRMSEPLKIAYGD-SISFQFGALPSSRSQSLEY--K 682
             +L N++ T S+   N TT     R+ E +++   D +++ +F A     +  L Y  K
Sbjct: 663 EVHLTNVE-TVSRNEQNGTTYQQRQRLDEVIELKDNDIALTIEFAATDYMNANELRYAYK 721

Query: 683 LND-EQQWQRFDWAL--LNFDQLLPGKYRLKVRSANPTQRYRTEAL-FDFEVLQPWYMTS 738
           L D E  W+  D+      +  L PG+YR  VR+ N    + + A   +  V+ PW+   
Sbjct: 722 LADFENSWRFTDYKTRTATYTNLDPGRYRFTVRAINQENEWSSNAAQLEIVVVPPWWDKP 781

Query: 739 IALVGYVLSVLGLLALALWWRTRMILAANRKLKAQVELKTSQL 781
           I  V   L  + L++  +W R   +   + +L  +VE KT  L
Sbjct: 782 IWRVTITLLGMLLISSMVWLRIASLKKRSAELALKVEEKTRDL 824



 Score = 34.7 bits (78), Expect = 4e-05
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 392 EHLWIATEKGLVRYNLSRRSIDTPNLPL--PLLQTAIQHLSLDSDGNLWGTSDYQIWSYS 449
           ++LW+ T  GL R ++   S     LP   P  +  I  +    +G LW  S+  +++YS
Sbjct: 111 QYLWVGTYSGLSRIDVDTESFKHYTLPASEPFNKQVINRIKTTHNGQLWIVSERNLYTYS 170