Pairwise Alignments

Query, 758 a.a., Fe(2+) transporter permease subunit FeoB from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., GTP-binding protein from Pseudomonas simiae WCS417

 Score = 55.8 bits (133), Expect = 5e-12
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 5   VLTVGNPNSGKTTLFNGLTGAKQQ-VGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALD 63
           +  VG PN GK+TLFN LT  +   VG+ +G+T +++ G     G  + + D  GI    
Sbjct: 5   IALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI---- 60

Query: 64  SGNDSNSIDESIASRAVLT-HPADVIINVVDATCLERSLYMTL--QLRELRRPMIVVLNK 120
              D + +DE +A +++L    ADV++ +VDA     +    +   LR+  +   VV NK
Sbjct: 61  -SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 MDALKRE 127
           +D +  E
Sbjct: 120 IDNIDPE 126



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 9/139 (6%)

Query: 4   QVLTVGNPNSGKTTLFNGLTGAKQQ-VGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYAL 62
           ++  +G PN GK+TL N + G  +  V +  G T +     F    ++++L D  G+   
Sbjct: 196 KIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFERNEEKYTLIDTAGV--R 253

Query: 63  DSGNDSNSIDE-SIASRAVLTHPADVIINVVDAT--CLERSLYMTLQLRELRRPMIVVLN 119
             G     +++ S+         A+V+I V+DA    ++  L +     E  R +++ +N
Sbjct: 254 KRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFALEAGRALVIAIN 313

Query: 120 KMDAL---KRERVHLDLKQ 135
           K D +   +R+ V ++L++
Sbjct: 314 KWDGMTPSERDFVKIELQR 332