Pairwise Alignments

Query, 758 a.a., Fe(2+) transporter permease subunit FeoB from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

 Score = 60.1 bits (144), Expect = 3e-13
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 7/135 (5%)

Query: 5   VLTVGNPNSGKTTLFNGLTGAKQQ-VGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALD 63
           V  VG PN GK+TLFN LT  +   V ++ G+T ++K G       EF + D  GI   +
Sbjct: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSE 64

Query: 64  SGNDSNSIDESIASRAVLTHPADVIINVVD--ATCLERSLYMTLQLRELRRPMIVVLNKM 121
            G ++    +S+A+       ADV++ +VD  A        +   LR + +P I+V+NK+
Sbjct: 65  EGVETKMAQQSLAA----IDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKV 120

Query: 122 DALKRERVHLDLKQL 136
           D +  +    +  QL
Sbjct: 121 DGIDADAASAEFWQL 135



 Score = 32.3 bits (72), Expect = 6e-05
 Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 4/137 (2%)

Query: 8   VGNPNSGKTTLFNGLTGAKQ-QVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGN 66
           +G PN GK+TL N + G ++  V +  G T +           E+ L D  G+      N
Sbjct: 211 IGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRIN 270

Query: 67  DSNSIDESIASRAVLTHPADVIINVVDA--TCLERSLYMTLQLRELRRPMIVVLNKMDAL 124
           ++     S+         A+V++ VVDA     ++ L +        R +++ +NK D L
Sbjct: 271 ETVE-KFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNKWDGL 329

Query: 125 KRERVHLDLKQLEAFLG 141
             +      K+L+  LG
Sbjct: 330 SFDVKEHVKKELDRRLG 346