Pairwise Alignments

Query, 599 a.a., arginine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., arginyl-tRNA synthetase from Agrobacterium fabrum C58

 Score =  134 bits (338), Expect = 8e-36
 Identities = 142/585 (24%), Positives = 240/585 (41%), Gaps = 88/585 (15%)

Query: 59  GDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIFLS----EEFL 114
           GD   N  M  AK LGTNPR  A+ ++  L  +G      +AGPGFIN+ +S    +  L
Sbjct: 44  GDVATNAAMVLAKPLGTNPRALAELLVPALQADGDVDGVNVAGPGFINLKVSVGYWQRLL 103

Query: 115 AAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHK 174
           A      +   R  V   A + I  +Y + N    MHVGH R  ++GD +   L F G+ 
Sbjct: 104 ADMIGQGVDFGRSTVG--AGQKINVEYVSANPTGPMHVGHCRGAVVGDTLANLLAFAGYG 161

Query: 175 VIRANHIGDWGTQFGMLIANL-ERVQKASGEVSMELSDLEAFYRESKKLYDEDEQFAETA 233
           V +  +I D G+Q  +L  ++  R ++A GE   ++  + +       L    +  A+  
Sbjct: 162 VTKEYYINDAGSQIDVLARSVFLRYREALGE---DIGSIPSGLYPGDYLVPVGQALAD-- 216

Query: 234 RNYVVKLQGGDPFCLEMW-----KKLVDVTMIQNQRNYDRLNVS---LTRENVMGESMYN 285
             Y +KL+       E W      K +D  M+  + +   LNV       E  + E    
Sbjct: 217 -EYGIKLRAMPE---EKWLPIVKDKAIDAMMVMIREDLALLNVRHDVFFSERTLHEGNGG 272

Query: 286 DMLPQIVSDLKAKGLAVE--------------DDGAQVVFLEEFKNKDGEPMGVIIQKRD 331
            +L   ++DL  KG   +              +D  Q +F      + G+ M   + K D
Sbjct: 273 PIL-SAINDLTFKGHVYKGTLPPPKGELPDDWEDREQTLFR---STEVGDDMDRALMKSD 328

Query: 332 GGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHA 391
           G + Y   D+A  K +++  G   ++Y + +    ++ +   + R        +++    
Sbjct: 329 GSYTYFAADVAYFKNKFDR-GFSEMIYVLGADHGGYVKRLEAVARAVSEGKSKLTVLLCQ 387

Query: 392 FGMMLGKDGRPFK--TRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVAM 449
             + L +DG P K   R+G  V L D++DE                           V  
Sbjct: 388 L-VKLFRDGEPVKMSKRSGDFVTLRDVVDE---------------------------VGR 419

Query: 450 AAVKYADLSKHRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVASVFAKAGVDMNELTGHI 508
             V++  L +  +    FD+  +    + N   Y+QYA+ R  S+F +A      L    
Sbjct: 420 DPVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCKSIFRQAQEAFPGLAPSA 479

Query: 509 Q--------ITEEKEKALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSF----- 555
           +        I++  E  L+AKL ++   ++S A   +PH +  YL++LAG F        
Sbjct: 480 EDMAASVALISDINELQLVAKLAEYPRLIESAALSHEPHRLAFYLYDLAGSFHGHWNKGK 539

Query: 556 -YEACPILVAEQESIKQSRLKLAALTAKTIKQGLALLGIDTLERM 599
            ++    +  +   +  +RL L    A  +K GL LLG D  + M
Sbjct: 540 DHQELRFINDKNRELSIARLGLVNAVANVLKSGLTLLGADAPDEM 584