Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 703 a.a., Flagellar biosynthesis protein FlhA from Variovorax sp. SCN45

 Score =  487 bits (1253), Expect = e-142
 Identities = 283/690 (41%), Positives = 419/690 (60%), Gaps = 28/690 (4%)

Query: 22  IGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTVLLIA 81
           I   ++VL  L ++  P+P+ LLD     N + + +VLL+T Y  RP++F+ FP++LLIA
Sbjct: 14  IALVLLVLGVLVVLFAPIPSGLLDFLILTNFSFAFLVLLLTFYMARPVEFSTFPSLLLIA 73

Query: 82  TLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIINFMVV 141
           TL RL+LNVA+TR++L       G AG VI A G  V+GGNY +GL+VFLIL+++ ++VV
Sbjct: 74  TLFRLSLNVAATRLIL-----SDGDAGRVIGAIGAFVVGGNYVIGLIVFLILIVVQYVVV 128

Query: 142 TKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGSMDGA 201
           T GA R+SEV+ARFTLD++PG+QM+IDADLN G IDQ +A+ RR  + KEA FYG+MDGA
Sbjct: 129 TSGAQRVSEVAARFTLDSMPGQQMSIDADLNMGFIDQAEAQRRRKNIEKEAGFYGAMDGA 188

Query: 202 SKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPSLLLS 261
           SKFVKGDAIAGI+IL INIIGGL IG++Q+ L + +A++ YTLLTIGDG+V Q+P+L+++
Sbjct: 189 SKFVKGDAIAGIIILLINIIGGLVIGVMQHGLPWGQALQTYTLLTIGDGIVTQVPALVIA 248

Query: 262 IGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFLALLAS 321
           +G  I+VTR ++D ++ ++ + Q+   PK L + A  L  + ++PG+P    L L     
Sbjct: 249 VGTGIIVTRSSSDTNLSREALRQVSSFPKTLLMVALALGGLLVLPGIPAIPTLVLTAGFL 308

Query: 322 GAAYWLHRKQKTKAEN-----------KNLPAKSDVETPTQRELSWDDVQPVDVIGLEVG 370
            AA  L+R  K K++N           +NL A          +  +  +Q V+ + + +G
Sbjct: 309 LAATLLYRAAKVKSDNAAQGMGDPIDPENLAAADGTAAAAASDDPYTLLQ-VEPVEVHLG 367

Query: 371 YRLIPLVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVG 430
               P++++  G   +ER+   RK+ + +FG ++P V  +D+  L+ + Y I L GV VG
Sbjct: 368 GNWGPVINQ-PGSVFMERIASFRKQHANEFGLVLPRVRFKDSSRLSADRYEIHLDGVLVG 426

Query: 431 EAEIRPDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVL 490
           + E R D+ LAI+P      I GE TRDP +GL A+WI E QRE A    +T+VD+ TV 
Sbjct: 427 KGEARADRLLAIHPSGDTKSIPGEPTRDPTYGLPALWIEERQREAAAQAKFTLVDAPTVF 486

Query: 491 ATHLSQLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEA 550
            THL+++L   +A L+   EV  LL  + +S P LVE  +P  LS   V KVLQNLL E 
Sbjct: 487 MTHLTEMLRRESATLLTRSEVDRLLSRVRKSQPGLVEELIPTVLSASDVQKVLQNLLREK 546

Query: 551 IPIRDIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQ 610
           + IR +  I++TL++    +++   LT  VR  L   I Q + G    L V+TL P +E 
Sbjct: 547 VSIRHVEAILETLADAGRATRDTAQLTEIVRQRLGHAICQGLIGEASALQVLTLDPAIES 606

Query: 611 ILHQTMQASGGESAG----------IEPGLAERLQMALSHATQEQELKGEPAVLLTSGVL 660
              Q+MQ + GE+            I+P L+E+L   L    +         VLL +  L
Sbjct: 607 QFLQSMQIAVGEAGATTAAGTQPFVIDPRLSEQLIKRLVQQAERMMKSNLLPVLLCAPEL 666

Query: 661 RSTLAKFVKNTIPNLRVLSYQEIPDEKQIR 690
           R  +    +  +P+LRVLS  E+P   +++
Sbjct: 667 RRHVRGLSERVMPHLRVLSMAEVPHTIELK 696