Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 699 a.a., Flagellar biosynthesis protein FlhA from Variovorax sp. SCN45

 Score =  730 bits (1884), Expect = 0.0
 Identities = 378/682 (55%), Positives = 503/682 (73%), Gaps = 15/682 (2%)

Query: 22  IGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTVLLIA 81
           +  P++++  L+M+VLP+P FLLDL FTFNIA+S++VLLV++YT + LDFAAFP VLL +
Sbjct: 23  LAGPILIIMILSMMVLPLPPFLLDLLFTFNIAMSVMVLLVSMYTMKALDFAAFPAVLLFS 82

Query: 82  TLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIINFMVV 141
           TLLRL+LNVASTRVVL++GH GP AAG VIEAFG+ ++GGN+AVG++VF+IL++INFMV+
Sbjct: 83  TLLRLSLNVASTRVVLMHGHTGPDAAGKVIEAFGHFLVGGNFAVGVMVFIILVLINFMVI 142

Query: 142 TKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGSMDGA 201
           TKGAGRI+EV ARF LDA+PGKQMAIDADLNAGLI +E AR RR EV +EADFYGSMDGA
Sbjct: 143 TKGAGRIAEVGARFMLDAMPGKQMAIDADLNAGLIGEEVARKRRQEVAQEADFYGSMDGA 202

Query: 202 SKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPSLLLS 261
           SKFV+GDAIAG+LI+ INIIGGL +GM+Q+ L F  A + YTLL IGDGLVAQIP+L++S
Sbjct: 203 SKFVRGDAIAGLLIMVINIIGGLIVGMVQHGLDFSTAGKTYTLLAIGDGLVAQIPALVIS 262

Query: 262 IGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFLALLAS 321
             A ++V+R  TDED+G Q+  QLF NP+ L +TAGI+ ++G++PGMP+ AFL +A    
Sbjct: 263 TAAGVIVSRVTTDEDVGSQLTGQLFANPQVLFLTAGIVGLLGMIPGMPNLAFLLIA---- 318

Query: 322 GAAYWL-----HRKQKTKAENKNLPAKSDVETP--TQRELSWDDVQPVDVIGLEVGYRLI 374
           G   WL      RK + +A  +   A++    P     E +WDDV  VD +G++VGYRLI
Sbjct: 319 GGLVWLGRRLVKRKPQQQAAQEAAAAQAATLAPGGEMAEATWDDVAMVDPLGMQVGYRLI 378

Query: 375 PLVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGEAEI 434
           PLVD+ Q GELL R+K +RKK++QD GFL+P VHIRDNLE+ PN+Y I+L  V +G  E 
Sbjct: 379 PLVDQSQQGELLGRIKSIRKKIAQDIGFLVPVVHIRDNLEIKPNTYVISLKDVEIGRGEA 438

Query: 435 RPDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVLATHL 494
            P+Q +AINPGQV G + G  TRDPAFGL AVWI   QR+ AQ  GYTVVD+ TV+ATHL
Sbjct: 439 FPNQWMAINPGQVSGTLPGAPTRDPAFGLPAVWIDASQRQQAQVYGYTVVDACTVMATHL 498

Query: 495 SQLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEAIPIR 554
           + L+  +AA+L+G +EVQ LL+ ++++APKL E+ VP  LSL  + KVLQNLL E +PIR
Sbjct: 499 NHLIQTHAAELLGRQEVQQLLDQIAKTAPKLTEDLVPKVLSLSTLHKVLQNLLDEEVPIR 558

Query: 555 DIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQILHQ 614
           D+RTI+  ++E+A   ++P  LT   R++L R I Q++   + E+ VI L   L+ +L Q
Sbjct: 559 DMRTILDVMAEHAPTIKDPTELTTLTRLALGRAITQQLFPGDAEMQVIGLDGALDGVLQQ 618

Query: 615 TMQASGGESAGIEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLAKFVKNTIPN 674
            +  SG    GIEPG+A+ L      A Q QE  G   VL+    LR  L++F++ ++P 
Sbjct: 619 ALSNSG----GIEPGIADNLLHQAQAAIQRQEQMGLAPVLVVQHSLRVLLSRFLRRSLPQ 674

Query: 675 LRVLSYQEIPDEKQIRIVQAVG 696
           L+VLS+ EIPD + I+I  A+G
Sbjct: 675 LKVLSHAEIPDSRTIKITAAIG 696