Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 705 a.a., Flagellar biosynthesis protein FlhA from Sphingobium sp. HT1-2

 Score =  615 bits (1587), Expect = e-180
 Identities = 336/672 (50%), Positives = 445/672 (66%), Gaps = 5/672 (0%)

Query: 25  PVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTVLLIATLL 84
           P   L  +  +++P+PA +LD+ F  NI +SL VL+V +   +PLDF++FPTVLL ATLL
Sbjct: 21  PFATLMVVLFMMVPVPAVMLDIGFITNIMISLAVLMVALNAAKPLDFSSFPTVLLFATLL 80

Query: 85  RLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIINFMVVTKG 144
           RLALNVASTRVVL+ GHEG  AAG VIEAFG+ +IGG+Y VG+ VF ILMIIN +V+TKG
Sbjct: 81  RLALNVASTRVVLVSGHEGSDAAGQVIEAFGHFLIGGDYVVGIFVFAILMIINLVVITKG 140

Query: 145 AGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGSMDGASKF 204
           AGR+SEVSARFTLDALPGKQMAIDADLNAGL+  E+A++RR EV  EADFYGSMDGASKF
Sbjct: 141 AGRVSEVSARFTLDALPGKQMAIDADLNAGLMTPEEAKLRRAEVATEADFYGSMDGASKF 200

Query: 205 VKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPSLLLSIGA 264
           VKGDAIAGILIL INIIGG+ +G++ + L   +A + Y LL IGD LVAQIP+LLLSI A
Sbjct: 201 VKGDAIAGILILAINIIGGIILGVVSHGLAMGDAAQTYILLAIGDALVAQIPALLLSIAA 260

Query: 265 AIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFLALLASGAA 324
           A +VTR  +++D+  QV  Q F   KA    A IL  +GI+PGMPH   L  A +A G A
Sbjct: 261 ASIVTRVKSEQDLSAQVAGQ-FGTGKAWVPVAAILGFLGILPGMPHLIILTAAAIAGGIA 319

Query: 325 YWLHRKQKTKAENKNLPAKSDVETPTQRELSWDDVQPVDVIGLEVGYRLIPLVDKDQGGE 384
           + L +  + KA      A      P    + W+DV    ++GLE+GY LI LVD+ +G  
Sbjct: 320 WQLRKAGQRKAAEPEPVA----PPPNPAIIEWNDVSDGAILGLEIGYGLIGLVDERKGAP 375

Query: 385 LLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGEAEIRPDQELAINP 444
           L+ R+ G+R++LS++ GF++P V ++DNL L PN YRIT+ GV VGE +I PD  LA++ 
Sbjct: 376 LMARITGIRRQLSKELGFVVPMVRVKDNLALEPNQYRITIAGVVVGEDDIWPDDLLALDS 435

Query: 445 GQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVLATHLSQLLTNNAAQ 504
           G + G + G   +DP FGLDAVWI   +R  A   GYTVVD  TV+ATHL+QL+  NAA+
Sbjct: 436 GMLEGTVAGRPAKDPTFGLDAVWISPAKRSEAVVAGYTVVDPPTVVATHLNQLIAMNAAE 495

Query: 505 LIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEAIPIRDIRTIVQTLS 564
           + G +E + LL+ L   AP+LV+   P  LSL  +  + + LL E I ++D R I + + 
Sbjct: 496 MFGLDEARKLLDNLKDVAPQLVDGLTPGTLSLTQISALCRALLSEGIALKDFRRICEAMV 555

Query: 565 EYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQILHQTMQASGGESA 624
           + A      + L  AVR  +  LI+Q +  V+  LPVITL  +LE +L Q M+ +G    
Sbjct: 556 DAARPDMNHEQLVEAVRQRIGALIIQGLVPVKMPLPVITLDGDLEAMLAQAMRVAGDAKH 615

Query: 625 GIEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLAKFVKNTIPNLRVLSYQEIP 684
            IEP L  R+  ++ HA +    +     ++TS V R  LA+  K  +P   VLS+ EIP
Sbjct: 616 PIEPSLGNRIVESVVHAARPMLGQARNFAIVTSPVARRALARLFKPHLPETPVLSFLEIP 675

Query: 685 DEKQIRIVQAVG 696
           D K + +V  VG
Sbjct: 676 DGKGVEVVAVVG 687