Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., flagellar export pore protein from Pseudomonas putida KT2440

 Score =  854 bits (2207), Expect = 0.0
 Identities = 439/685 (64%), Positives = 552/685 (80%), Gaps = 10/685 (1%)

Query: 22  IGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTVLLIA 81
           +G P+++L  LAM++LP+P FLLD+FFTFNIALS+VVLLV VY  RPLDFAAFPT+LL+A
Sbjct: 22  LGVPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAAFPTILLVA 81

Query: 82  TLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIINFMVV 141
           TLLRLALNVASTRVV+L+G EG GAAG VI+AFG VVIGGNY VG VVF ILMIINF+VV
Sbjct: 82  TLLRLALNVASTRVVMLHGQEGHGAAGKVIQAFGEVVIGGNYVVGAVVFAILMIINFVVV 141

Query: 142 TKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGSMDGA 201
           TKGAGRISEVSARFTLDA+PGKQMAIDADLNAGLIDQ QA+ RR EV +EA+FYGSMDGA
Sbjct: 142 TKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQAQAKHRRAEVAQEAEFYGSMDGA 201

Query: 202 SKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPSLLLS 261
           SKFV+GDAIAG+LILFIN+IGG+ IGM+Q+++ F EA ++Y LLTIGDGLVAQ+PSLLLS
Sbjct: 202 SKFVRGDAIAGLLILFINLIGGMLIGMLQHNMSFSEAGKVYALLTIGDGLVAQLPSLLLS 261

Query: 262 IGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFLALLAS 321
             AAIMVTR +  EDMG+ +  Q+FD+PKAL ++  ++ VMG+VPGMPH AFL L L+A+
Sbjct: 262 TAAAIMVTRASGSEDMGKLINRQMFDSPKALAVSGALMIVMGLVPGMPHIAFLSLGLMAA 321

Query: 322 GAAYWLHRKQ---KTKAENKNLPAKSDVETPTQ----RELSWDDVQPVDVIGLEVGYRLI 374
           G AY + +KQ   K KA+ +    +  + +P +    +EL WDDV P+D+IGLEVGYRLI
Sbjct: 322 GGAYLVWKKQQQAKVKAQQEAQRQQDLLPSPQRALETKELGWDDVTPIDMIGLEVGYRLI 381

Query: 375 PLVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGEAEI 434
           PLVD++QGG+LL R+KGVRKKLSQD GFL+P VHIRDNL+L P++YR+TLMGV + EAEI
Sbjct: 382 PLVDRNQGGQLLARIKGVRKKLSQDLGFLMPTVHIRDNLDLQPSAYRLTLMGVILAEAEI 441

Query: 435 RPDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVLATHL 494
            PD+ELAINPGQV+G ++G   RDPAFGL+AVWI   QR  AQ+LGYTVVD+STV+ATHL
Sbjct: 442 YPDRELAINPGQVFGTLNGIAARDPAFGLEAVWIDVGQRSQAQSLGYTVVDASTVVATHL 501

Query: 495 SQLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEAIPIR 554
           +Q+L  +  +LIGHEEVQ LL++L++++PKL E  VP  +SL  ++KVLQ LL E +P+R
Sbjct: 502 NQILQKHCHELIGHEEVQQLLQVLAKASPKLAEELVPGVISLSGLLKVLQALLSEQVPVR 561

Query: 555 DIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQILHQ 614
           DIR+I + ++  A KSQ+   L AAVR+ L R IVQ I GVE ELPVITL P LEQIL  
Sbjct: 562 DIRSIAEAIANNAGKSQDTAALVAAVRVGLCRAIVQSIVGVESELPVITLEPRLEQILLN 621

Query: 615 TMQASG-GESAGI--EPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLAKFVKNT 671
           ++Q +G G+  G+  EP +AE+LQ +L  A Q QE++G+PA+LL +G +R+ L++F +  
Sbjct: 622 SLQRAGQGQEDGVLLEPSMAEKLQRSLIEAAQRQEMQGQPAILLVAGPIRAMLSRFGRLA 681

Query: 672 IPNLRVLSYQEIPDEKQIRIVQAVG 696
           +PNL VL+YQEIPD KQ+ IV  VG
Sbjct: 682 VPNLHVLAYQEIPDNKQVTIVATVG 706