Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 695 a.a., type III secretion system export apparatus subunit SctV from Paraburkholderia sabiae LMG 24235

 Score =  320 bits (820), Expect = 1e-91
 Identities = 222/689 (32%), Positives = 362/689 (52%), Gaps = 47/689 (6%)

Query: 22  IGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTVLLIA 81
           IG  VM++A +++++LP+P F++D+    NIA ++ +L++T+Y    +  +AFP++LL  
Sbjct: 13  IGILVMIIAIVSLMILPLPFFMIDILVGLNIATAVTLLMITLYVPSVVSLSAFPSILLFT 72

Query: 82  TLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIINFMVV 141
           TL RL+L++AST+ +LL+       AG++I++FG +V+GGN  VG+VVF+I+ ++ F+V+
Sbjct: 73  TLYRLSLSIASTKSILLHAE-----AGDIIDSFGKLVVGGNLVVGMVVFIIITLVQFIVI 127

Query: 142 TKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGSMDGA 201
            KG+ R++EV ARFTLDA+PGKQM+IDADL A L+  ++AR +R  +  E+  +G MDGA
Sbjct: 128 AKGSERVAEVGARFTLDAMPGKQMSIDADLRANLLTADEARHKRATLALESALHGGMDGA 187

Query: 202 SKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPSLLLS 261
            KFVKGDA+AG++I  INI+ GL++G++ + +   EA   +++L++GD +VAQ+P+LLLS
Sbjct: 188 MKFVKGDAVAGLIITMINIVAGLAVGVLYHGMTAGEAANRFSILSVGDAMVAQLPALLLS 247

Query: 262 IGAAIMVTRQNTDED-----MGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFL 316
           + A +M+TR   D D     +G ++  QL  +  AL   A +L     VPG P   FL L
Sbjct: 248 VAAGVMITRVADDRDEKPRSLGAEIGKQLMGSAPALGFAALLLVAFAAVPGFPWPLFLVL 307

Query: 317 ALLASGAAYWLHRKQKTKAENKNLPAKSDVETPTQRELSWDDVQPVDVIGLEVGYRLIPL 376
           + +    A+ L ++  ++A       +S      + E       P       +G RL   
Sbjct: 308 SGILGFTAWKLKKRGPSRAFEDLEAVRSMQRAGAKSETPAISSVP-PAFSCALGVRL--- 363

Query: 377 VDKDQGGELL-----ERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGE 431
              D  G L      +  +  R  L ++ G   P +H+  + +L P++    +  V    
Sbjct: 364 -SSDLRGRLAVDRLNQAFESERASLQEELGLPFPGIHMWISDKLPPSTCEFLMHDVPAFT 422

Query: 432 AEI---------RPDQELAINPGQVYGMIDGER--TRDPAFGLDAVWIREDQREHA-QAL 479
            E+          P +  A  P         ER   RD   G   +    D+   A +  
Sbjct: 423 LELPQGKVLLADLPQRLAAAQPDDTEAKTLAERCEQRDSIDGSGQLSYWHDEATLANKTS 482

Query: 480 GYTVVDSSTVLATHLSQLLTNNAAQLIGHEEVQNLLEMLSRSAPKL---VENFVPDQLSL 536
           G+    +  V+A    QLL  NA+  +G  EVQ + E L    P L   V+  +P Q   
Sbjct: 483 GWR---AEQVIAHVSVQLLRRNASLFLGVNEVQWIQEQLGIEYPGLLAEVQKVLPPQR-- 537

Query: 537 GVVVKVLQNLLHEAIPIRDIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVE 596
             +  VL+ LL E IPIR+IR I+++L  +  K ++  +LT  VR  L R +        
Sbjct: 538 --IADVLRRLLEEQIPIRNIRNIMESLIAWGPKEKDVLMLTEYVRGDLARFLAHRAALGA 595

Query: 597 PELPVITLIPELEQILHQTM-QASGGESAGIEPGLAERLQMALSHATQEQELKGEPAV-L 654
             LP I L   +EQ + Q + Q   G    + P   +++   +        L   P + L
Sbjct: 596 RILPAILLDGPVEQHIRQAIKQTPTGNYLALPP---DQISFLVDSIESFAGLAPRPGIAL 652

Query: 655 LTSGVLRSTLAKFVKNTIPNLRVLSYQEI 683
           +TS  +R  + + ++  +  L V SYQE+
Sbjct: 653 VTSMDIRRYVRRMIEGRLSWLSVYSYQEL 681