Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., flagellar biosynthesis protein FlhA from Erwinia tracheiphila SCR3

 Score =  719 bits (1856), Expect = 0.0
 Identities = 369/688 (53%), Positives = 500/688 (72%), Gaps = 6/688 (0%)

Query: 10  KLPSIPQRSMPAIGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPL 69
           +LP+I       +  PV++L  L+M+VLP+P+F+LDL FTFNIALS++VLLV ++T+R L
Sbjct: 9   RLPNIKDTQWQVMAGPVLILMILSMMVLPLPSFVLDLLFTFNIALSIMVLLVAMFTQRTL 68

Query: 70  DFAAFPTVLLIATLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVV 129
           +FAAFPT+LL +TLLRLALNVASTR++LL GH G  AAG+V+EAFG+ ++GGN+A+G+VV
Sbjct: 69  EFAAFPTILLFSTLLRLALNVASTRIILLEGHTGASAAGHVVEAFGHFLVGGNFAIGIVV 128

Query: 130 FLILMIINFMVVTKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVT 189
           F+IL+IINFMV+TKGAGRI+EV ARF LD +PGKQMAIDADLNAGLI +E A+ RR EVT
Sbjct: 129 FIILVIINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEEVAKKRRSEVT 188

Query: 190 KEADFYGSMDGASKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGD 249
           +EADFYGSMDGASKFV+GDAIAGI+I+ IN+IGGL +G++Q+ +    A E YTLLTIGD
Sbjct: 189 QEADFYGSMDGASKFVRGDAIAGIMIMVINVIGGLLVGVVQHGMDVGHAAESYTLLTIGD 248

Query: 250 GLVAQIPSLLLSIGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMP 309
           GLVAQIP+L++S  A ++VTR +T++D+G+Q++ QLF NP+ + ++AG+L ++G+VPGMP
Sbjct: 249 GLVAQIPALVISTAAGVIVTRVSTEQDVGEQMVRQLFTNPRVMMLSAGVLGMLGLVPGMP 308

Query: 310 HFAFLFLALLASGAAYWLHRKQ-KTKAENKNLPAKSDVETPTQRELSWDDVQPVDVIGLE 368
           +F FL       G A++L  KQ K K E +    K+  ETP   E SW DVQ  D +G+E
Sbjct: 309 NFVFLLFTAALLGLAWYLRGKQAKPKVEPQGGVVKT-TETPANVEASWTDVQLEDSLGME 367

Query: 369 VGYRLIPLVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVA 428
           VGYRLIP+VD  Q GELL R++ +RKK +Q+ GFL P VHIRDN+EL P  YRI + GV 
Sbjct: 368 VGYRLIPMVDHLQDGELLGRIRSIRKKFAQEMGFLPPVVHIRDNMELPPARYRILMKGVE 427

Query: 429 VGEAEIRPDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSST 488
           +G  +  P + +AINPG   G + GE T DPAFGL A+WI    +E AQ  GYTVV++ST
Sbjct: 428 IGSGDAYPGRWMAINPGTAAGTLPGEATVDPAFGLAAIWIDSALKEQAQIQGYTVVEAST 487

Query: 489 VLATHLSQLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLH 548
           V+ATHL+ L+  +A++L G +E Q LL+ +++  PKL E+ +P  ++L  + KVLQNLL 
Sbjct: 488 VVATHLNHLIGQHASELFGRQEAQQLLDRVTQEMPKLTEDLIPGVITLTTLHKVLQNLLA 547

Query: 549 EAIPIRDIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPEL 608
           E + IRD+RTI++TL+E+A    +P  LTA VR++L R I Q+      E  VI L   L
Sbjct: 548 ERVSIRDMRTIIETLAEHAPVQNDPQELTAVVRVALGRAITQQWFPGTGEAQVIGLDTTL 607

Query: 609 EQILHQTMQASGGESAGIEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLAKFV 668
           E++L Q +Q  G    G+EPGLA+RL      A   QE  G P VLL +  LR+ LA+F+
Sbjct: 608 ERLLLQALQGGG----GLEPGLADRLLAQAQSALAHQESLGAPPVLLVNHPLRALLARFL 663

Query: 669 KNTIPNLRVLSYQEIPDEKQIRIVQAVG 696
           +  +P L V+S  E+ D +QIR+   +G
Sbjct: 664 RRNLPQLMVISNLEMTDNRQIRMTSTIG 691