Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., Putative truncated flagellar export/assembly protein LfhA from Escherichia coli ECRC102

 Score =  446 bits (1147), Expect = e-129
 Identities = 250/573 (43%), Positives = 365/573 (63%), Gaps = 10/573 (1%)

Query: 131 LILMIINFMVVTKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTK 190
           L L+ INF+VVTKGA RISEVSARFTLDA+PGKQMAIDADLNAGLI+Q QA+ RR +V  
Sbjct: 8   LTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVAS 67

Query: 191 EADFYGSMDGASKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDG 250
           EADFYG+MDGASKFV+GDAIAG++IL IN+IGG+ IG+ +Y+L    A + Y L+TIGDG
Sbjct: 68  EADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYVLMTIGDG 127

Query: 251 LVAQIPSLLLSIGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPH 310
           LVAQIPSLLLS  AAI+VTR + + D+   V  QL  +P  L    GI+FV+ +VPGMPH
Sbjct: 128 LVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRHQLLASPSVLYTATGIMFVLAVVPGMPH 187

Query: 311 FAF-LFLALLASGAAYWLHRKQKTKAENKNLPAKSDVETPT-QRELSWDDVQPVDVIGLE 368
             F LF ALL         + Q  +AE K+L   +   T T ++++SW+ +  ++ I L 
Sbjct: 188 LPFLLFSALLGFTGWRMSKQPQAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLS 247

Query: 369 VGYRLIPLVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVA 428
           +GY+L+ LVDK QG  L +R++GVR+ +S   G L+P + IR+N  L P+ Y I + G+ 
Sbjct: 248 LGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIK 307

Query: 429 VGEAEIRPDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSST 488
             EA+I  D+ +A+   + YG IDG    DPA+G+   WI+  Q+  A  +GY V+DS++
Sbjct: 308 ADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPAQKAKALNMGYQVIDSAS 367

Query: 489 VLATHLSQLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLH 548
           V+ATH+++++ +    L  ++++  L   LS  AP+L E+ +   L+   ++KV + LL 
Sbjct: 368 VIATHVNKIVRSYIPDLFNYDDITQLHNRLSSMAPRLAED-LSAALNYSQLLKVYRALLT 426

Query: 549 EAIPIRDIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPEL 608
           E + +RDI TI   L   ++ +++  +L A VR++L+R I       + EL V TL  EL
Sbjct: 427 EGVSLRDIVTIATVLVASSAVTKDHILLAADVRLALRRSITHPFVR-KQELTVYTLNNEL 485

Query: 609 EQILHQTM-QASGG-----ESAGIEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRS 662
           E +L   + QA  G     +S  ++P +  + Q  +    ++ +  G+  VLL    LR 
Sbjct: 486 ENLLTNVVNQAQQGGKVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRP 545

Query: 663 TLAKFVKNTIPNLRVLSYQEIPDEKQIRIVQAV 695
            LA++ +   P L VLSY E+PDE +++I+ A+
Sbjct: 546 LLARYARLFAPGLHVLSYNEVPDELELKIMGAL 578